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  5. LOC_Os06g35950.1

LOC_Os06g35950.1 (LOC_Os06g35950)


Aliases : LOC_Os06g35950

Description : Enzyme classification.EC_4 lyases.EC_4.3 carbon-nitrogen lyase(50.4.3 : 95.4)


Gene families : OG0000347 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000347_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os06g35950.1
Cluster HCCA: Cluster_140

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00149p00021810 SSL3,... Enzyme classification.EC_4 lyases.EC_4.3 carbon-nitrogen lyase 0.02 OrthoFinder output from all 47 species
AT1G74020 SS2 strictosidine synthase 2 0.05 OrthoFinder output from all 47 species
AT3G57010 No alias Calcium-dependent phosphotriesterase superfamily protein 0.03 OrthoFinder output from all 47 species
Als_g50950 No alias EC_4.3 carbon-nitrogen lyase & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene11208.t1 SSL3, Aspi01Gene11208 EC_4.3 carbon-nitrogen lyase & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene45098.t1 Aspi01Gene45098 EC_4.3 carbon-nitrogen lyase & original description: none 0.05 OrthoFinder output from all 47 species
Aspi01Gene63166.t1 Aspi01Gene63166 EC_4.3 carbon-nitrogen lyase & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene72148.t1 LAP3, Aspi01Gene72148 EC_4.3 carbon-nitrogen lyase & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0032.g024742 No alias EC_4.3 carbon-nitrogen lyase & original description: CDS=95-1279 0.02 OrthoFinder output from all 47 species
Azfi_s0050.g030960 LAP3 EC_4.3 carbon-nitrogen lyase & original description: CDS=1-1704 0.02 OrthoFinder output from all 47 species
Ceric.09G008600.1 LAP3, Ceric.09G008600 EC_4.3 carbon-nitrogen lyase & original description:... 0.04 OrthoFinder output from all 47 species
Dde_g20885 LAP3 EC_4.3 carbon-nitrogen lyase & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g24160 No alias EC_4.3 carbon-nitrogen lyase & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g02502 SSL3 EC_4.3 carbon-nitrogen lyase & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g10876 No alias EC_4.3 carbon-nitrogen lyase & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01008192001 No alias Enzyme classification.EC_4 lyases.EC_4.3 carbon-nitrogen... 0.02 OrthoFinder output from all 47 species
LOC_Os09g20810.1 LOC_Os09g20810 Enzyme classification.EC_4 lyases.EC_4.3 carbon-nitrogen... 0.04 OrthoFinder output from all 47 species
Len_g16702 SSL3 EC_4.3 carbon-nitrogen lyase & original description: none 0.02 OrthoFinder output from all 47 species
MA_10429962g0010 No alias Protein STRICTOSIDINE SYNTHASE-LIKE 3 OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species
MA_12783g0010 No alias Protein STRICTOSIDINE SYNTHASE-LIKE 3 OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species
Msp_g00549 No alias EC_4.3 carbon-nitrogen lyase & original description: none 0.02 OrthoFinder output from all 47 species
Msp_g11858 No alias EC_4.3 carbon-nitrogen lyase & original description: none 0.02 OrthoFinder output from all 47 species
Msp_g47278 No alias EC_4.3 carbon-nitrogen lyase & original description: none 0.01 OrthoFinder output from all 47 species
Ore_g15358 SSL3 EC_4.3 carbon-nitrogen lyase & original description: none 0.02 OrthoFinder output from all 47 species
Pnu_g05247 No alias EC_4.3 carbon-nitrogen lyase & original description: none 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0207.g025809 LAP3 EC_4.3 carbon-nitrogen lyase & original description: CDS=1-1395 0.02 OrthoFinder output from all 47 species
Solyc03g114560.2.1 Solyc03g114560 Enzyme classification.EC_4 lyases.EC_4.3 carbon-nitrogen... 0.03 OrthoFinder output from all 47 species
Solyc04g040090.4.1 Solyc04g040090 Protein STRICTOSIDINE SYNTHASE-LIKE 10 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
Solyc07g055750.4.1 Solyc07g055750 Protein STRICTOSIDINE SYNTHASE-LIKE 10 OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species
Solyc11g071800.2.1 SSL3, Solyc11g071800 Protein STRICTOSIDINE SYNTHASE-LIKE 3 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
Spa_g41445 No alias EC_4.3 carbon-nitrogen lyase & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g10013 No alias EC_4.3 carbon-nitrogen lyase & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g14975 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Zm00001e028742_P001 Zm00001e028742 Protein STRICTOSIDINE SYNTHASE-LIKE 10 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
Zm00001e033989_P001 Zm00001e033989 Enzyme classification.EC_4 lyases.EC_4.3 carbon-nitrogen... 0.03 OrthoFinder output from all 47 species
Zm00001e038523_P001 LAP3, Zm00001e038523 Protein STRICTOSIDINE SYNTHASE-LIKE 13 OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
BP GO:0009058 biosynthetic process IEA Interproscan
MF GO:0016844 strictosidine synthase activity IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0005102 signaling receptor binding IEP HCCA
CC GO:0005576 extracellular region IEP HCCA
MF GO:0008083 growth factor activity IEP HCCA
BP GO:0008283 cell population proliferation IEP HCCA
MF GO:0030545 signaling receptor regulator activity IEP HCCA
MF GO:0030546 signaling receptor activator activity IEP HCCA
MF GO:0048018 receptor ligand activity IEP HCCA
MF GO:0140677 molecular function activator activity IEP HCCA
InterPro domains Description Start Stop
IPR018119 Strictosidine_synth_cons-reg 52 83
No external refs found!