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  5. LOC_Os06g37450.1

LOC_Os06g37450.1 (GATA22, CGA1, GNL,...)


Aliases : GATA22, CGA1, GNL, LOC_Os06g37450

Description : transcription factor (GATA)


Gene families : OG0000100 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000100_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os06g37450.1
Cluster HCCA: Cluster_28

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00001p00210810 GATA5,... RNA biosynthesis.transcriptional activation.C2C2... 0.03 OrthoFinder output from all 47 species
AMTR_s00002p00254680 GATA22, CGA1,... No description available 0.03 OrthoFinder output from all 47 species
AMTR_s00064p00107710 GATA22, CGA1,... RNA biosynthesis.transcriptional activation.C2C2... 0.04 OrthoFinder output from all 47 species
AMTR_s00147p00053080 GATA15,... RNA biosynthesis.transcriptional activation.C2C2... 0.02 OrthoFinder output from all 47 species
AMTR_s00148p00049970 BME3-ZF, BME3,... RNA biosynthesis.transcriptional activation.C2C2... 0.03 OrthoFinder output from all 47 species
AMTR_s00155p00085360 GATA11,... RNA biosynthesis.transcriptional activation.C2C2... 0.04 OrthoFinder output from all 47 species
AT4G34680 GATA3 GATA transcription factor 3 0.03 OrthoFinder output from all 47 species
AT5G26930 GATA23 GATA transcription factor 23 0.02 OrthoFinder output from all 47 species
Adi_g036776 GATA5 transcription factor *(A/B-GATA) & original description: none 0.04 OrthoFinder output from all 47 species
Adi_g098113 No alias transcription factor *(A/B-GATA) & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g14443 GNC, GATA21 transcription factor *(A/B-GATA) & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g13362 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g13992 GATA22, CGA1, GNL transcription factor *(A/B-GATA) & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g14739 GATA22, CGA1, GNL transcription factor *(A/B-GATA) & original description: none 0.03 OrthoFinder output from all 47 species
Als_g11812 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g38669 GATA2 transcription factor *(A/B-GATA) & original description: none 0.02 OrthoFinder output from all 47 species
Als_g43029 GATA9 transcription factor *(A/B-GATA) & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g05872 GATA22, CGA1, GNL transcription factor *(A/B-GATA) & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g21032 GATA9 transcription factor *(A/B-GATA) & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene10302.t1 GATA23, Aspi01Gene10302 transcription factor *(A/B-GATA) & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene67105.t1 GATA5, Aspi01Gene67105 transcription factor *(A/B-GATA) & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene69106.t1 GATA4, Aspi01Gene69106 transcription factor *(A/B-GATA) & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g02619 GATA2 transcription factor *(A/B-GATA) & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g25774 GATA22, CGA1, GNL transcription factor *(A/B-GATA) & original description: none 0.04 OrthoFinder output from all 47 species
Ceric.01G120400.1 GATA22, CGA1,... transcription factor *(A/B-GATA) & original description:... 0.04 OrthoFinder output from all 47 species
Ceric.36G061000.1 GATA12, Ceric.36G061000 transcription factor *(A/B-GATA) & original description:... 0.03 OrthoFinder output from all 47 species
Cpa|evm.model.tig00001094.21 GATA7 RNA biosynthesis.transcriptional activation.C2C2... 0.02 OrthoFinder output from all 47 species
Cre01.g025050 GATA23 RNA biosynthesis.transcriptional activation.C2C2... 0.02 OrthoFinder output from all 47 species
Cre10.g435450 GATA1 RNA biosynthesis.transcriptional activation.C2C2... 0.02 OrthoFinder output from all 47 species
Dcu_g50721 GATA12 transcription factor *(A/B-GATA) & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g34018 GATA12 transcription factor *(A/B-GATA) & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g04639 GATA2 transcription factor *(A/B-GATA) & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g21727 GATA1 transcription factor *(A/B-GATA) & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g26819 GATA9 transcription factor *(A/B-GATA) & original description: none 0.04 OrthoFinder output from all 47 species
GSVIVT01015204001 GNC, GATA21 RNA biosynthesis.transcriptional activation.C2C2... 0.03 OrthoFinder output from all 47 species
GSVIVT01018833001 GATA5 RNA biosynthesis.transcriptional activation.C2C2... 0.02 OrthoFinder output from all 47 species
Gb_25568 GATA20 transcription factor (GATA) 0.02 OrthoFinder output from all 47 species
LOC_Os05g06340.1 GATA23, LOC_Os05g06340 transcription factor (GATA) 0.05 OrthoFinder output from all 47 species
LOC_Os09g08150.1 LOC_Os09g08150 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
LOC_Os12g42970.1 GATA4, LOC_Os12g42970 transcription factor (GATA) 0.04 OrthoFinder output from all 47 species
Len_g46521 GATA5 transcription factor *(A/B-GATA) & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g12909 GATA5 transcription factor *(A/B-GATA) & original description: none 0.02 OrthoFinder output from all 47 species
MA_10434815g0010 GATA4 transcription factor (GATA) 0.04 OrthoFinder output from all 47 species
MA_92522g0010 GATA20 transcription factor (GATA) 0.02 OrthoFinder output from all 47 species
Mp1g03950.1 GATA9 transcription factor (GATA) 0.02 OrthoFinder output from all 47 species
Msp_g48249 GATA9 transcription factor *(A/B-GATA) & original description: none 0.02 OrthoFinder output from all 47 species
Nbi_g22942 GATA9 transcription factor *(A/B-GATA) & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g03972 GATA22, CGA1, GNL transcription factor *(A/B-GATA) & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g14050 GATA19 transcription factor *(A/B-GATA) & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g20176 GATA22, CGA1, GNL transcription factor *(A/B-GATA) & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g06393 GATA6 transcription factor *(A/B-GATA) & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g09526 GATA5 transcription factor *(A/B-GATA) & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g15675 GATA15 transcription factor *(A/B-GATA) & original description: none 0.02 OrthoFinder output from all 47 species
Pnu_g17490 GATA12 transcription factor *(A/B-GATA) & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g05839 GATA5 transcription factor *(A/B-GATA) & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g06282 GATA5 transcription factor *(A/B-GATA) & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g11160 GATA15 transcription factor *(A/B-GATA) & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0024.g009072 GATA4 transcription factor *(A/B-GATA) & original description:... 0.03 OrthoFinder output from all 47 species
Sam_g08124 No alias transcription factor *(A/B-GATA) & original description: none 0.03 OrthoFinder output from all 47 species
Solyc02g062760.4.1 HAN, MNP,... transcription factor (GATA) 0.02 OrthoFinder output from all 47 species
Solyc03g033660.4.1 GATA5, Solyc03g033660 transcription factor (GATA) 0.06 OrthoFinder output from all 47 species
Solyc08g066510.3.1 GATA12, Solyc08g066510 transcription factor (GATA) 0.02 OrthoFinder output from all 47 species
Spa_g15861 GATA12 transcription factor *(A/B-GATA) & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g29922 GATA12 transcription factor *(A/B-GATA) & original description: none 0.05 OrthoFinder output from all 47 species
Tin_g14454 GATA5 transcription factor *(A/B-GATA) & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g20099 GATA15 transcription factor *(A/B-GATA) & original description: none 0.02 OrthoFinder output from all 47 species
Zm00001e015260_P001 GATA5, Zm00001e015260 transcription factor (GATA) 0.02 OrthoFinder output from all 47 species
Zm00001e029060_P002 GATA9, Zm00001e029060 transcription factor (GATA) 0.03 OrthoFinder output from all 47 species
Zm00001e032219_P001 GATA12, Zm00001e032219 transcription factor (GATA) 0.03 OrthoFinder output from all 47 species
Zm00001e037876_P002 GATA4, Zm00001e037876 transcription factor (GATA) 0.03 OrthoFinder output from all 47 species
Zm00001e039468_P001 Zm00001e039468 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
BP GO:0006355 regulation of DNA-templated transcription IEA Interproscan
MF GO:0008270 zinc ion binding IEA Interproscan
MF GO:0043565 sequence-specific DNA binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004144 diacylglycerol O-acyltransferase activity IEP HCCA
MF GO:0005506 iron ion binding IEP HCCA
MF GO:0008374 O-acyltransferase activity IEP HCCA
BP GO:0008610 lipid biosynthetic process IEP HCCA
MF GO:0016411 acylglycerol O-acyltransferase activity IEP HCCA
MF GO:0016491 oxidoreductase activity IEP HCCA
MF GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen IEP HCCA
MF GO:0020037 heme binding IEP HCCA
BP GO:0044255 cellular lipid metabolic process IEP HCCA
BP GO:0045017 glycerolipid biosynthetic process IEP HCCA
BP GO:0046486 glycerolipid metabolic process IEP HCCA
MF GO:0046906 tetrapyrrole binding IEP HCCA
BP GO:0055114 obsolete oxidation-reduction process IEP HCCA
InterPro domains Description Start Stop
IPR000679 Znf_GATA 203 237
No external refs found!