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  5. LOC_Os06g40550.1

LOC_Os06g40550.1 (ABCG26, WBC27, LOC_Os06g40550)


Aliases : ABCG26, WBC27, LOC_Os06g40550

Description : sporopollenin precursor exporter. subfamily ABCG transporter


Gene families : OG0000438 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000438_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os06g40550.1
Cluster HCCA: Cluster_149

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00011p00258490 ABCG14,... Solute transport.primary active transport.ABC... 0.02 OrthoFinder output from all 47 species
AMTR_s00030p00144980 evm_27.TU.AmTr_v1... Solute transport.primary active transport.ABC... 0.02 OrthoFinder output from all 47 species
AMTR_s00057p00214480 evm_27.TU.AmTr_v1... Solute transport.primary active transport.ABC... 0.02 OrthoFinder output from all 47 species
AMTR_s00061p00187570 ABCG26, WBC27,... Solute transport.primary active transport.ABC... 0.08 OrthoFinder output from all 47 species
AT3G13220 ABCG26, WBC27 ABC-2 type transporter family protein 0.14 OrthoFinder output from all 47 species
Adi_g018185 ABCG26, WBC27 sporopollenin precursor exporter *(ABCG26) & original... 0.01 OrthoFinder output from all 47 species
Ala_g02542 No alias subfamily ABCG transporter & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g19172 No alias subfamily ABCG transporter & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g29670 No alias subfamily ABCG transporter & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g21658 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Aspi01Gene10922.t1 Aspi01Gene10922 subfamily ABCG transporter & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g06567 No alias subfamily ABCG transporter & original description: none 0.02 OrthoFinder output from all 47 species
Ceric.13G057300.1 ABCG26, WBC27,... subfamily ABCG transporter & original description:... 0.07 OrthoFinder output from all 47 species
Ceric.17G037500.1 Ceric.17G037500 subfamily ABCG transporter & original description:... 0.03 OrthoFinder output from all 47 species
Ceric.34G074000.1 Ceric.34G074000 not classified & original description: pacid=50622980... 0.03 OrthoFinder output from all 47 species
Dac_g16939 No alias subfamily ABCG transporter & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g11538 No alias subfamily ABCG transporter & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g13413 No alias subfamily ABCG transporter & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g34069 ABCG26, WBC27 subfamily ABCG transporter & original description: none 0.08 OrthoFinder output from all 47 species
Dde_g47725 ABCG26, WBC27 subfamily ABCG transporter & original description: none 0.12 OrthoFinder output from all 47 species
GSVIVT01001660001 No alias Solute transport.primary active transport.ABC... 0.05 OrthoFinder output from all 47 species
GSVIVT01014402001 No alias Solute transport.primary active transport.ABC... 0.06 OrthoFinder output from all 47 species
GSVIVT01014733001 ABCG26, WBC27 Solute transport.primary active transport.ABC... 0.11 OrthoFinder output from all 47 species
Gb_00289 ABCG26, WBC27 sporopollenin precursor exporter. subfamily ABCG transporter 0.03 OrthoFinder output from all 47 species
Len_g07347 ABCG26, WBC27 subfamily ABCG transporter & original description: none 0.06 OrthoFinder output from all 47 species
MA_16472g0010 ABCG26, WBC27 ABC transporter G family member 26 OS=Arabidopsis... 0.08 OrthoFinder output from all 47 species
MA_16472g0020 ABCG26, WBC27 ABC transporter G family member 26 OS=Arabidopsis... 0.07 OrthoFinder output from all 47 species
MA_81274g0010 ABCG14 subfamily ABCG transporter 0.02 OrthoFinder output from all 47 species
Mp3g19930.1 ABCG26, WBC27 ABC transporter G family member 26 OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species
Mp6g05900.1 ABCG14 subfamily ABCG transporter 0.02 OrthoFinder output from all 47 species
Nbi_g10128 ABCG26, WBC27 subfamily ABCG transporter & original description: none 0.05 OrthoFinder output from all 47 species
Ore_g29229 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g44059 ABCG26, WBC27 not classified & original description: none 0.08 OrthoFinder output from all 47 species
Pir_g13582 No alias subfamily ABCG transporter & original description: none 0.02 OrthoFinder output from all 47 species
Pnu_g33201 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g03210 No alias subfamily ABCG transporter & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g13835 ABCG26, WBC27 not classified & original description: none 0.06 OrthoFinder output from all 47 species
Ppi_g57469 ABCG26, WBC27 subfamily ABCG transporter & original description: none 0.06 OrthoFinder output from all 47 species
Sacu_v1.1_s0062.g015589 No alias not classified & original description: CDS=22-1557 0.03 OrthoFinder output from all 47 species
Solyc07g065770.3.1 ABCG26, WBC27,... ABC transporter G family member 26 OS=Arabidopsis... 0.15 OrthoFinder output from all 47 species
Solyc07g065780.2.1 ABCG26, WBC27,... ABC transporter G family member 26 OS=Arabidopsis... 0.16 OrthoFinder output from all 47 species
Solyc12g013630.1.1 Solyc12g013630 subfamily ABCG transporter 0.16 OrthoFinder output from all 47 species
Spa_g05719 ABCG26, WBC27 subfamily ABCG transporter & original description: none 0.08 OrthoFinder output from all 47 species
Spa_g06146 No alias subfamily ABCG transporter & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g28498 No alias subfamily ABCG transporter & original description: none 0.02 OrthoFinder output from all 47 species
Zm00001e037432_P001 ABCG26, WBC27,... sporopollenin precursor exporter. subfamily ABCG transporter 0.15 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEA Interproscan
CC GO:0016020 membrane IEA Interproscan
MF GO:0016887 ATP hydrolysis activity IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0005506 iron ion binding IEP HCCA
BP GO:0006417 regulation of translation IEP HCCA
BP GO:0006508 proteolysis IEP HCCA
BP GO:0006511 ubiquitin-dependent protein catabolic process IEP HCCA
BP GO:0009056 catabolic process IEP HCCA
BP GO:0009057 macromolecule catabolic process IEP HCCA
BP GO:0009889 regulation of biosynthetic process IEP HCCA
BP GO:0009890 negative regulation of biosynthetic process IEP HCCA
BP GO:0009892 negative regulation of metabolic process IEP HCCA
BP GO:0010468 regulation of gene expression IEP HCCA
BP GO:0010556 regulation of macromolecule biosynthetic process IEP HCCA
BP GO:0010558 negative regulation of macromolecule biosynthetic process IEP HCCA
BP GO:0010605 negative regulation of macromolecule metabolic process IEP HCCA
BP GO:0010608 post-transcriptional regulation of gene expression IEP HCCA
BP GO:0010629 negative regulation of gene expression IEP HCCA
MF GO:0016491 oxidoreductase activity IEP HCCA
MF GO:0016614 oxidoreductase activity, acting on CH-OH group of donors IEP HCCA
MF GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen IEP HCCA
MF GO:0016798 hydrolase activity, acting on glycosyl bonds IEP HCCA
MF GO:0016799 hydrolase activity, hydrolyzing N-glycosyl compounds IEP HCCA
MF GO:0016840 carbon-nitrogen lyase activity IEP HCCA
MF GO:0016843 amine-lyase activity IEP HCCA
MF GO:0016844 strictosidine synthase activity IEP HCCA
BP GO:0017148 negative regulation of translation IEP HCCA
BP GO:0019222 regulation of metabolic process IEP HCCA
BP GO:0019941 modification-dependent protein catabolic process IEP HCCA
MF GO:0030597 RNA glycosylase activity IEP HCCA
MF GO:0030598 rRNA N-glycosylase activity IEP HCCA
BP GO:0031323 regulation of cellular metabolic process IEP HCCA
BP GO:0031324 negative regulation of cellular metabolic process IEP HCCA
BP GO:0031326 regulation of cellular biosynthetic process IEP HCCA
BP GO:0031327 negative regulation of cellular biosynthetic process IEP HCCA
BP GO:0034248 regulation of amide metabolic process IEP HCCA
BP GO:0034249 negative regulation of amide metabolic process IEP HCCA
BP GO:0043632 modification-dependent macromolecule catabolic process IEP HCCA
BP GO:0044248 cellular catabolic process IEP HCCA
BP GO:0044265 cellular macromolecule catabolic process IEP HCCA
BP GO:0048519 negative regulation of biological process IEP HCCA
BP GO:0048523 negative regulation of cellular process IEP HCCA
MF GO:0050660 flavin adenine dinucleotide binding IEP HCCA
BP GO:0050789 regulation of biological process IEP HCCA
BP GO:0050794 regulation of cellular process IEP HCCA
BP GO:0051171 regulation of nitrogen compound metabolic process IEP HCCA
BP GO:0051172 negative regulation of nitrogen compound metabolic process IEP HCCA
BP GO:0051246 regulation of protein metabolic process IEP HCCA
BP GO:0051248 negative regulation of protein metabolic process IEP HCCA
BP GO:0051603 proteolysis involved in protein catabolic process IEP HCCA
BP GO:0055114 obsolete oxidation-reduction process IEP HCCA
BP GO:0060255 regulation of macromolecule metabolic process IEP HCCA
BP GO:0065007 biological regulation IEP HCCA
BP GO:0080090 regulation of primary metabolic process IEP HCCA
MF GO:0140098 catalytic activity, acting on RNA IEP HCCA
MF GO:0140102 catalytic activity, acting on a rRNA IEP HCCA
MF GO:0140640 catalytic activity, acting on a nucleic acid IEP HCCA
BP GO:1901575 organic substance catabolic process IEP HCCA
BP GO:2000112 regulation of cellular macromolecule biosynthetic process IEP HCCA
BP GO:2000113 negative regulation of cellular macromolecule biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR013525 ABC_2_trans 417 626
IPR003439 ABC_transporter-like_ATP-bd 92 242
No external refs found!