Aliases : LOC_Os06g41040
Description : Putative pentatricopeptide repeat-containing protein At3g13770, mitochondrial OS=Arabidopsis thaliana (sp|q9lic3|pp227_arath : 774.0)
Gene families : OG0000000 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AMTR_s00011p00233950 | No alias | Pentatricopeptide repeat-containing protein At4g37170... | 0.02 | OrthoFinder output from all 47 species | |
| AMTR_s00039p00023570 | EMB2758 | Pentatricopeptide repeat-containing protein At4g33990... | 0.03 | OrthoFinder output from all 47 species | |
| AMTR_s00057p00151990 | evm_27.TU.AmTr_v1... | Pentatricopeptide repeat-containing protein At4g13650... | 0.02 | OrthoFinder output from all 47 species | |
| AMTR_s00062p00213230 | No alias | Pentatricopeptide repeat-containing protein At3g09040,... | 0.02 | OrthoFinder output from all 47 species | |
| AMTR_s00083p00015670 | No alias | Putative pentatricopeptide repeat-containing protein... | 0.03 | OrthoFinder output from all 47 species | |
| AMTR_s00084p00089150 | OTP86,... | Pentatricopeptide repeat-containing protein At3g63370,... | 0.02 | OrthoFinder output from all 47 species | |
| AMTR_s00155p00018120 | evm_27.TU.AmTr_v1... | Pentatricopeptide repeat-containing protein At4g21300... | 0.02 | OrthoFinder output from all 47 species | |
| AT1G09410 | No alias | pentatricopeptide (PPR) repeat-containing protein | 0.07 | OrthoFinder output from all 47 species | |
| AT1G69350 | No alias | Tetratricopeptide repeat (TPR)-like superfamily protein | 0.08 | OrthoFinder output from all 47 species | |
| AT2G13600 | No alias | Pentatricopeptide repeat (PPR) superfamily protein | 0.03 | OrthoFinder output from all 47 species | |
| AT3G02010 | No alias | Pentatricopeptide repeat (PPR) superfamily protein | 0.11 | OrthoFinder output from all 47 species | |
| AT3G13880 | No alias | Tetratricopeptide repeat (TPR)-like superfamily protein | 0.06 | OrthoFinder output from all 47 species | |
| AT4G37170 | No alias | Pentatricopeptide repeat (PPR) superfamily protein | 0.1 | OrthoFinder output from all 47 species | |
| AT5G40410 | No alias | Tetratricopeptide repeat (TPR)-like superfamily protein | 0.08 | OrthoFinder output from all 47 species | |
| Adi_g004488 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Adi_g055440 | EMB2758 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ala_g07993 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ala_g16618 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ala_g20781 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ala_g22711 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ala_g24227 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Als_g30880 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Als_g55326 | No alias | not classified & original description: none | 0.01 | OrthoFinder output from all 47 species | |
| Aob_g28661 | OTP84 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aob_g37093 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Aspi01Gene18687.t1 | Aspi01Gene18687 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aspi01Gene26858.t1 | Aspi01Gene26858 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Aspi01Gene45256.t1 | EMB2758, Aspi01Gene45256 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Azfi_s0028.g024007 | No alias | not classified & original description: CDS=1-1332 | 0.04 | OrthoFinder output from all 47 species | |
| Azfi_s2265.g110088 | No alias | not classified & original description: CDS=116-2917 | 0.03 | OrthoFinder output from all 47 species | |
| Cba_g05315 | No alias | not classified & original description: none | 0.01 | OrthoFinder output from all 47 species | |
| Cba_g07249 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Cba_g07291 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Cba_g07512 | EMB2758 | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Cba_g07747 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Cba_g20881 | No alias | not classified & original description: none | 0.01 | OrthoFinder output from all 47 species | |
| Cba_g20884 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Cba_g27691 | No alias | not classified & original description: none | 0.06 | OrthoFinder output from all 47 species | |
| Cba_g34646 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Cba_g35174 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Cba_g67765 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ceric.20G001900.1 | Ceric.20G001900 | not classified & original description: pacid=50565969... | 0.08 | OrthoFinder output from all 47 species | |
| Ceric.33G057300.1 | Ceric.33G057300 | not classified & original description: pacid=50607177... | 0.03 | OrthoFinder output from all 47 species | |
| Cpa|evm.model.tig00000383.101 | No alias | No description available | 0.02 | OrthoFinder output from all 47 species | |
| Dac_g05753 | EMB2758 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Dac_g19091 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Dac_g21950 | No alias | not classified & original description: none | 0.06 | OrthoFinder output from all 47 species | |
| Dac_g24892 | VAC1, ECB2, ATECB2 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Dac_g26033 | CRR22 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Dac_g27799 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Dac_g29961 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Dac_g42967 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Dac_g44312 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Dcu_g12590 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Dcu_g17245 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Dde_g02978 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Dde_g04440 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Dde_g08437 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Dde_g22601 | CRR22 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Gb_04428 | VAC1, ECB2, ATECB2 | Pentatricopeptide repeat-containing protein DOT4,... | 0.03 | OrthoFinder output from all 47 species | |
| Gb_07638 | OTP84 | Pentatricopeptide repeat-containing protein At4g21300... | 0.04 | OrthoFinder output from all 47 species | |
| Gb_17092 | CRR22 | RNA editing factor (OTP82) | 0.03 | OrthoFinder output from all 47 species | |
| Gb_17620 | No alias | Pentatricopeptide repeat-containing protein At4g13650... | 0.03 | OrthoFinder output from all 47 species | |
| Gb_26694 | CRR22 | Pentatricopeptide repeat-containing protein At2g27610... | 0.04 | OrthoFinder output from all 47 species | |
| Gb_27291 | CRR22 | Pentatricopeptide repeat-containing protein At2g22070... | 0.05 | OrthoFinder output from all 47 species | |
| Gb_38068 | OTP86 | RNA editing factor (OTP82) | 0.03 | OrthoFinder output from all 47 species | |
| Len_g02911 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Len_g04783 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Len_g18057 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Lfl_g07418 | EMB2758 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| MA_632994g0010 | No alias | Pentatricopeptide repeat-containing protein At2g33680... | 0.02 | OrthoFinder output from all 47 species | |
| Msp_g09439 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Msp_g17745 | REME1 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Msp_g32485 | EMB2758 | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Msp_g34507 | No alias | not classified & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Msp_g34538 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Ore_g02438 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ore_g27419 | No alias | ssDNA-binding protein *(OSB) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Pnu_g12890 | CRR2 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Pnu_g15871 | OTP84 | not classified & original description: none | 0.06 | OrthoFinder output from all 47 species | |
| Pnu_g22615 | EMB2261 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Pnu_g30584 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Ppi_g07419 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ppi_g31411 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ppi_g53972 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ppi_g59354 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0014.g006276 | No alias | not classified & original description: CDS=1-1806 | 0.04 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0048.g013529 | No alias | ssDNA-binding protein *(OSB) & original description: CDS=539-3667 | 0.02 | OrthoFinder output from all 47 species | |
| Sam_g02108 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Sam_g03800 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Sam_g12066 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Sam_g12399 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Sam_g13588 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Sam_g16664 | No alias | ssDNA-binding protein *(OSB) & original description: none | 0.01 | OrthoFinder output from all 47 species | |
| Sam_g27190 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Sam_g27788 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Sam_g28003 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Sam_g28859 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Sam_g33433 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Sam_g33616 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Sam_g34646 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Sam_g35189 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Sam_g50566 | No alias | not classified & original description: none | 0.01 | OrthoFinder output from all 47 species | |
| Smo105197 | CRR22 | Pentatricopeptide repeat-containing protein At3g49710... | 0.03 | OrthoFinder output from all 47 species | |
| Smo41818 | No alias | Pentatricopeptide repeat-containing protein At3g09040,... | 0.04 | OrthoFinder output from all 47 species | |
| Solyc01g006920.4.1 | Solyc01g006920 | Pentatricopeptide repeat-containing protein At4g39530... | 0.03 | OrthoFinder output from all 47 species | |
| Solyc01g090510.2.1 | Solyc01g090510 | Putative pentatricopeptide repeat-containing protein... | 0.03 | OrthoFinder output from all 47 species | |
| Solyc01g110010.3.1 | Solyc01g110010 | Pentatricopeptide repeat-containing protein At1g74600,... | 0.06 | OrthoFinder output from all 47 species | |
| Solyc02g068630.1.1 | Solyc02g068630 | Putative pentatricopeptide repeat-containing protein... | 0.05 | OrthoFinder output from all 47 species | |
| Solyc03g063690.1.1 | MEF1, Solyc03g063690 | RNA editing factor (MEF1) | 0.03 | OrthoFinder output from all 47 species | |
| Solyc03g093630.3.1 | CRR2, Solyc03g093630 | Pentatricopeptide repeat-containing protein At2g27610... | 0.03 | OrthoFinder output from all 47 species | |
| Solyc03g097850.1.1 | Solyc03g097850 | Pentatricopeptide repeat-containing protein At5g16860... | 0.03 | OrthoFinder output from all 47 species | |
| Solyc03g119120.3.1 | Solyc03g119120 | Pentatricopeptide repeat-containing protein At4g02750... | 0.03 | OrthoFinder output from all 47 species | |
| Solyc04g074160.3.1 | Solyc04g074160 | Putative pentatricopeptide repeat-containing protein... | 0.04 | OrthoFinder output from all 47 species | |
| Solyc04g076330.3.1 | CRR22, Solyc04g076330 | Pentatricopeptide repeat-containing protein At2g29760,... | 0.04 | OrthoFinder output from all 47 species | |
| Solyc05g009400.3.1 | Solyc05g009400 | Pentatricopeptide repeat-containing protein At3g29230... | 0.03 | OrthoFinder output from all 47 species | |
| Solyc05g012630.2.1 | Solyc05g012630 | Putative pentatricopeptide repeat-containing protein... | 0.03 | OrthoFinder output from all 47 species | |
| Solyc06g053850.4.1 | Solyc06g053850 | Pentatricopeptide repeat-containing protein At4g02750... | 0.03 | OrthoFinder output from all 47 species | |
| Solyc06g069700.4.1 | Solyc06g069700 | Pentatricopeptide repeat-containing protein At5g61400... | 0.03 | OrthoFinder output from all 47 species | |
| Solyc06g082880.2.1 | Solyc06g082880 | RNA editing factor (MEF13) | 0.03 | OrthoFinder output from all 47 species | |
| Solyc06g084580.1.1 | Solyc06g084580 | Pentatricopeptide repeat-containing protein At4g20770... | 0.03 | OrthoFinder output from all 47 species | |
| Solyc08g023640.1.1 | Solyc08g023640 | Pentatricopeptide repeat-containing protein At4g21065... | 0.03 | OrthoFinder output from all 47 species | |
| Solyc09g009950.4.1 | Solyc09g009950 | RNA editing factor (MEF10) | 0.02 | OrthoFinder output from all 47 species | |
| Solyc09g010070.1.1 | EMB2758, Solyc09g010070 | Pentatricopeptide repeat-containing protein At4g33990... | 0.1 | OrthoFinder output from all 47 species | |
| Solyc09g065710.1.1 | OTP86, Solyc09g065710 | RNA editing factor (OTP86) | 0.04 | OrthoFinder output from all 47 species | |
| Solyc11g005970.1.1 | Solyc11g005970 | Pentatricopeptide repeat-containing protein At3g24000,... | 0.06 | OrthoFinder output from all 47 species | |
| Solyc11g008970.1.1 | Solyc11g008970 | Pentatricopeptide repeat-containing protein At4g39952,... | 0.03 | OrthoFinder output from all 47 species | |
| Solyc11g017290.1.1 | Solyc11g017290 | Pentatricopeptide repeat-containing protein At1g31430... | 0.03 | OrthoFinder output from all 47 species | |
| Solyc11g067210.1.1 | Solyc11g067210 | Pentatricopeptide repeat-containing protein At2g27610... | 0.03 | OrthoFinder output from all 47 species | |
| Solyc12g099620.1.1 | Solyc12g099620 | Pentatricopeptide repeat-containing protein At4g32430,... | 0.04 | OrthoFinder output from all 47 species | |
| Spa_g02636 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Spa_g12845 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Spa_g14568 | No alias | not classified & original description: none | 0.06 | OrthoFinder output from all 47 species | |
| Spa_g20461 | No alias | not classified & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Spa_g26166 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Tin_g03539 | OTP86 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Tin_g10298 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Tin_g16806 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Tin_g23122 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Tin_g26445 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Tin_g30237 | No alias | not classified & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Tin_g30551 | No alias | ssDNA-binding protein *(OSB) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Tin_g35293 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Tin_g35298 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Tin_g45488 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Zm00001e012422_P001 | OSB1, Zm00001e012422 | ssDNA-binding protein (OSB) | 0.04 | OrthoFinder output from all 47 species | |
| Zm00001e015727_P001 | Zm00001e015727 | Pentatricopeptide repeat-containing protein At5g66520... | 0.04 | OrthoFinder output from all 47 species | |
| Zm00001e016923_P001 | CRR2, Zm00001e016923 | Pentatricopeptide repeat-containing protein At3g46790,... | 0.03 | OrthoFinder output from all 47 species | |
| Zm00001e018565_P001 | Zm00001e018565 | Pentatricopeptide repeat-containing protein At3g13880... | 0.07 | OrthoFinder output from all 47 species | |
| Zm00001e021453_P001 | CRR28, Zm00001e021453 | Pentatricopeptide repeat-containing protein At5g06540... | 0.08 | OrthoFinder output from all 47 species | |
| Zm00001e022858_P001 | Zm00001e022858 | Pentatricopeptide repeat-containing protein At3g57430,... | 0.02 | OrthoFinder output from all 47 species | |
| Zm00001e030605_P001 | Zm00001e030605 | Pentatricopeptide repeat-containing protein At1g31430... | 0.12 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0008270 | zinc ion binding | IEA | Interproscan |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No Predicted GO terms available for this sequence |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR002885 | Pentatricopeptide_repeat | 75 | 121 |
| IPR002885 | Pentatricopeptide_repeat | 176 | 222 |
| IPR002885 | Pentatricopeptide_repeat | 279 | 306 |
| IPR002885 | Pentatricopeptide_repeat | 313 | 337 |
| IPR002885 | Pentatricopeptide_repeat | 251 | 277 |
| IPR002885 | Pentatricopeptide_repeat | 351 | 374 |
| IPR032867 | DYW_dom | 449 | 571 |
| No external refs found! |
