Aliases : LOC_Os06g42670
Description : no hits & (original description: none)
Gene families : OG0000166 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000166_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: LOC_Os06g42670.1 | |
| Cluster | HCCA: Cluster_6 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| ChrUn.fgenesh.mRNA.16 | No alias | no hits & (original description: none) | 0.02 | OrthoFinder output from all 47 species | |
| LOC_Os01g03590.1 | LOC_Os01g03590 | no hits & (original description: none) | 0.02 | OrthoFinder output from all 47 species | |
| LOC_Os01g19960.1 | LOC_Os01g19960 | no hits & (original description: none) | 0.05 | OrthoFinder output from all 47 species | |
| LOC_Os01g33630.1 | LOC_Os01g33630 | no hits & (original description: none) | 0.02 | OrthoFinder output from all 47 species | |
| LOC_Os01g38810.1 | LOC_Os01g38810 | no hits & (original description: none) | 0.02 | OrthoFinder output from all 47 species | |
| LOC_Os02g08280.1 | LOC_Os02g08280 | no hits & (original description: none) | 0.03 | OrthoFinder output from all 47 species | |
| LOC_Os02g25370.1 | LOC_Os02g25370 | no hits & (original description: none) | 0.04 | OrthoFinder output from all 47 species | |
| LOC_Os02g25520.1 | LOC_Os02g25520 | no hits & (original description: none) | 0.04 | OrthoFinder output from all 47 species | |
| LOC_Os02g51230.1 | LOC_Os02g51230 | no hits & (original description: none) | 0.03 | OrthoFinder output from all 47 species | |
| LOC_Os04g07170.1 | LOC_Os04g07170 | no hits & (original description: none) | 0.04 | OrthoFinder output from all 47 species | |
| LOC_Os04g11410.1 | LOC_Os04g11410 | no hits & (original description: none) | 0.04 | OrthoFinder output from all 47 species | |
| LOC_Os04g20450.1 | LOC_Os04g20450 | no hits & (original description: none) | 0.03 | OrthoFinder output from all 47 species | |
| LOC_Os04g28650.1 | LOC_Os04g28650 | no hits & (original description: none) | 0.05 | OrthoFinder output from all 47 species | |
| LOC_Os04g43590.1 | LOC_Os04g43590 | no hits & (original description: none) | 0.03 | OrthoFinder output from all 47 species | |
| LOC_Os05g03950.1 | LOC_Os05g03950 | no hits & (original description: none) | 0.03 | OrthoFinder output from all 47 species | |
| LOC_Os05g16580.1 | LOC_Os05g16580 | no hits & (original description: none) | 0.02 | OrthoFinder output from all 47 species | |
| LOC_Os05g18990.1 | LOC_Os05g18990 | no hits & (original description: none) | 0.04 | OrthoFinder output from all 47 species | |
| LOC_Os05g19700.1 | LOC_Os05g19700 | no hits & (original description: none) | 0.04 | OrthoFinder output from all 47 species | |
| LOC_Os05g26100.1 | LOC_Os05g26100 | no hits & (original description: none) | 0.02 | OrthoFinder output from all 47 species | |
| LOC_Os05g50880.1 | LOC_Os05g50880 | no hits & (original description: none) | 0.02 | OrthoFinder output from all 47 species | |
| LOC_Os06g15050.1 | LOC_Os06g15050 | no hits & (original description: none) | 0.04 | OrthoFinder output from all 47 species | |
| LOC_Os06g15850.1 | EIN4, LOC_Os06g15850 | Ethylene receptor 4 OS=Oryza sativa subsp. japonica... | 0.05 | OrthoFinder output from all 47 species | |
| LOC_Os06g19310.1 | LOC_Os06g19310 | no hits & (original description: none) | 0.03 | OrthoFinder output from all 47 species | |
| LOC_Os06g35350.1 | LOC_Os06g35350 | no hits & (original description: none) | 0.04 | OrthoFinder output from all 47 species | |
| LOC_Os07g09540.1 | LOC_Os07g09540 | no hits & (original description: none) | 0.03 | OrthoFinder output from all 47 species | |
| LOC_Os07g31900.1 | LOC_Os07g31900 | no hits & (original description: none) | 0.04 | OrthoFinder output from all 47 species | |
| LOC_Os07g32750.1 | LOC_Os07g32750 | no hits & (original description: none) | 0.03 | OrthoFinder output from all 47 species | |
| LOC_Os07g46120.1 | LOC_Os07g46120 | no hits & (original description: none) | 0.02 | OrthoFinder output from all 47 species | |
| LOC_Os08g05430.1 | LOC_Os08g05430 | no hits & (original description: none) | 0.02 | OrthoFinder output from all 47 species | |
| LOC_Os08g13300.1 | LOC_Os08g13300 | no hits & (original description: none) | 0.03 | OrthoFinder output from all 47 species | |
| LOC_Os08g21140.1 | LOC_Os08g21140 | no hits & (original description: none) | 0.04 | OrthoFinder output from all 47 species | |
| LOC_Os08g26280.1 | LOC_Os08g26280 | no hits & (original description: none) | 0.02 | OrthoFinder output from all 47 species | |
| LOC_Os09g09420.1 | LOC_Os09g09420 | no hits & (original description: none) | 0.03 | OrthoFinder output from all 47 species | |
| LOC_Os09g20160.1 | LOC_Os09g20160 | no hits & (original description: none) | 0.04 | OrthoFinder output from all 47 species | |
| LOC_Os09g25240.1 | LOC_Os09g25240 | no hits & (original description: none) | 0.03 | OrthoFinder output from all 47 species | |
| LOC_Os09g37550.1 | LOC_Os09g37550 | no hits & (original description: none) | 0.02 | OrthoFinder output from all 47 species | |
| LOC_Os10g08002.1 | LOC_Os10g08002 | no hits & (original description: none) | 0.02 | OrthoFinder output from all 47 species | |
| LOC_Os10g29010.1 | LOC_Os10g29010 | no hits & (original description: none) | 0.02 | OrthoFinder output from all 47 species | |
| LOC_Os11g14350.1 | LOC_Os11g14350 | no hits & (original description: none) | 0.04 | OrthoFinder output from all 47 species | |
| LOC_Os11g24870.1 | LOC_Os11g24870 | no hits & (original description: none) | 0.03 | OrthoFinder output from all 47 species | |
| LOC_Os11g35762.1 | LOC_Os11g35762 | no hits & (original description: none) | 0.04 | OrthoFinder output from all 47 species | |
| LOC_Os11g43430.1 | LOC_Os11g43430 | no hits & (original description: none) | 0.02 | OrthoFinder output from all 47 species | |
| LOC_Os11g44100.1 | LOC_Os11g44100 | no hits & (original description: none) | 0.03 | OrthoFinder output from all 47 species | |
| LOC_Os11g45490.1 | LOC_Os11g45490 | no hits & (original description: none) | 0.04 | OrthoFinder output from all 47 species | |
| LOC_Os12g01870.1 | LOC_Os12g01870 | no hits & (original description: none) | 0.05 | OrthoFinder output from all 47 species | |
| LOC_Os12g03770.1 | LOC_Os12g03770 | no hits & (original description: none) | 0.02 | OrthoFinder output from all 47 species | |
| LOC_Os12g11600.1 | LOC_Os12g11600 | no hits & (original description: none) | 0.04 | OrthoFinder output from all 47 species | |
| LOC_Os12g14200.1 | LOC_Os12g14200 | no hits & (original description: none) | 0.04 | OrthoFinder output from all 47 species | |
| LOC_Os12g14820.1 | LOC_Os12g14820 | no hits & (original description: none) | 0.02 | OrthoFinder output from all 47 species | |
| LOC_Os12g25300.1 | LOC_Os12g25300 | no hits & (original description: none) | 0.03 | OrthoFinder output from all 47 species | |
| LOC_Os12g26070.1 | LOC_Os12g26070 | no hits & (original description: none) | 0.03 | OrthoFinder output from all 47 species | |
| LOC_Os12g31980.1 | LOC_Os12g31980 | no hits & (original description: none) | 0.02 | OrthoFinder output from all 47 species | |
| LOC_Os12g36480.1 | LOC_Os12g36480 | no hits & (original description: none) | 0.02 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0004650 | polygalacturonase activity | IEP | HCCA |
| BP | GO:0006486 | protein glycosylation | IEP | HCCA |
| BP | GO:0043413 | macromolecule glycosylation | IEP | HCCA |
| BP | GO:0070085 | glycosylation | IEP | HCCA |
No InterPro domains available for this sequence
| No external refs found! |
