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  5. LOC_Os06g45730.1

LOC_Os06g45730.1 (ATBPM2, BPM2, LOC_Os06g45730)


Aliases : ATBPM2, BPM2, LOC_Os06g45730

Description : BTB/POZ and MATH domain-containing protein 1 OS=Arabidopsis thaliana (sp|q8l765|bpm1_arath : 233.0)


Gene families : OG0000564 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000564_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os06g45730.1

Target Alias Description ECC score Gene Family Method Actions
LOC_Os02g20590.1 ATBPM2, BPM2,... BTB/POZ and MATH domain-containing protein 2... 0.05 OrthoFinder output from all 47 species
LOC_Os04g35370.1 ATBPM2, BPM2,... BTB/POZ and MATH domain-containing protein 2... 0.03 OrthoFinder output from all 47 species
LOC_Os05g44530.1 ATBPM2, BPM2,... BTB/POZ and MATH domain-containing protein 2... 0.02 OrthoFinder output from all 47 species
LOC_Os08g13000.1 ATBPM2, BPM2,... BTB/POZ and MATH domain-containing protein 2... 0.04 OrthoFinder output from all 47 species
LOC_Os10g28810.1 ATBPM2, BPM2,... BTB/POZ and MATH domain-containing protein 2... 0.02 OrthoFinder output from all 47 species
LOC_Os10g29180.1 ATBPM2, BPM2,... BTB/POZ and MATH domain-containing protein 1... 0.05 OrthoFinder output from all 47 species
LOC_Os10g29380.1 ATBPM3, BPM3,... BTB/POZ and MATH domain-containing protein 3... 0.06 OrthoFinder output from all 47 species
Zm00001e005040_P001 ATBPM2, BPM2,... BTB/POZ and MATH domain-containing protein 2... 0.05 OrthoFinder output from all 47 species
Zm00001e012800_P001 ATBPM2, BPM2,... BTB/POZ and MATH domain-containing protein 2... 0.02 OrthoFinder output from all 47 species
Zm00001e030370_P001 ATBPM2, BPM2,... BTB/POZ and MATH domain-containing protein 2... 0.04 OrthoFinder output from all 47 species
Zm00001e033378_P002 ATBPM2, BPM2,... BTB/POZ and MATH domain-containing protein 2... 0.06 OrthoFinder output from all 47 species
Zm00001e039614_P001 ATBPM2, BPM2,... BTB/POZ and MATH domain-containing protein 1... 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004527 exonuclease activity IEP HCCA
BP GO:0006511 ubiquitin-dependent protein catabolic process IEP HCCA
MF GO:0008408 3'-5' exonuclease activity IEP HCCA
BP GO:0009057 macromolecule catabolic process IEP HCCA
BP GO:0019941 modification-dependent protein catabolic process IEP HCCA
BP GO:0043632 modification-dependent macromolecule catabolic process IEP HCCA
BP GO:0044248 cellular catabolic process IEP HCCA
BP GO:0044265 cellular macromolecule catabolic process IEP HCCA
BP GO:0051603 proteolysis involved in protein catabolic process IEP HCCA
InterPro domains Description Start Stop
IPR000210 BTB/POZ_dom 177 294
No external refs found!