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  5. LOC_Os06g46435.1

LOC_Os06g46435.1 (NAD4, LOC_Os06g46435)


Aliases : NAD4, LOC_Os06g46435

Description : component NdhD of NDH membrane subcomplex M


Gene families : OG0008904 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0008904_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os06g46435.1
Cluster HCCA: Cluster_121

Target Alias Description ECC score Gene Family Method Actions
Aev_g42225 No alias not classified & original description: none 0.34 OrthoFinder output from all 47 species
Aev_g45032 No alias not classified & original description: none 0.38 OrthoFinder output from all 47 species
Ceric.05G043900.1 NAD4, Ceric.05G043900 component *(NdhD) of NDH membrane subcomplex M &... 0.08 OrthoFinder output from all 47 species
Ceric.05G044200.1 NAD5, NAD5.1,... component *(NdhD) of NDH membrane subcomplex M &... 0.02 OrthoFinder output from all 47 species
Ceric.16G017700.1 NAD4, Ceric.16G017700 component *(NdhD) of NDH membrane subcomplex M &... 0.04 OrthoFinder output from all 47 species
Ceric.35G068600.1 NAD4, Ceric.35G068600 component *(NdhD) of NDH membrane subcomplex M &... 0.36 OrthoFinder output from all 47 species
GSVIVT01004976001 No alias NAD(P)H-quinone oxidoreductase chain 4, chloroplastic... 0.11 OrthoFinder output from all 47 species
Lfl_g03264 NDHF component *(NdhD) of NDH membrane subcomplex M &... 0.22 OrthoFinder output from all 47 species
Mp5g13050.1 No alias NAD(P)H-quinone oxidoreductase chain 4, chloroplastic... 0.1 OrthoFinder output from all 47 species
Mp8g02440.1 No alias no hits & (original description: none) 0.1 OrthoFinder output from all 47 species
Nbi_g07107 NAD4 component *(NdhD) of NDH membrane subcomplex M &... 0.08 OrthoFinder output from all 47 species
Pir_g57552 NAD4 component *(NdhD) of NDH membrane subcomplex M &... 0.14 OrthoFinder output from all 47 species
Smo137786 No alias Photosynthesis.photophosphorylation.chlororespiration.NAD... 0.22 OrthoFinder output from all 47 species
Solyc01g065585.1.1 NAD4, Solyc01g065585 NAD(P)H-quinone oxidoreductase chain 4, chloroplastic... 0.38 OrthoFinder output from all 47 species
Solyc01g065610.1.1 Solyc01g065610 NAD(P)H-quinone oxidoreductase chain 4, chloroplastic... 0.42 OrthoFinder output from all 47 species
Solyc01g065620.1.1 Solyc01g065620 NAD(P)H-quinone oxidoreductase chain 4, chloroplastic... 0.14 OrthoFinder output from all 47 species
Solyc01g065640.3.1 Solyc01g065640 NAD(P)H-quinone oxidoreductase chain 4, chloroplastic... 0.35 OrthoFinder output from all 47 species
Solyc02g011750.1.1 Solyc02g011750 NAD(P)H-quinone oxidoreductase chain 4, chloroplastic... 0.38 OrthoFinder output from all 47 species
Solyc10g047420.3.1 Solyc10g047420 NAD(P)H-quinone oxidoreductase chain 4, chloroplastic... 0.34 OrthoFinder output from all 47 species
Solyc11g021213.1.1 Solyc11g021213 NAD(P)H-quinone oxidoreductase chain 4, chloroplastic... 0.42 OrthoFinder output from all 47 species
Solyc11g021215.1.1 Solyc11g021215 NAD(P)H-quinone oxidoreductase chain 4, chloroplastic... 0.41 OrthoFinder output from all 47 species
Solyc11g044647.1.1 Solyc11g044647 NAD(P)H-quinone oxidoreductase chain 4, chloroplastic... 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP HCCA
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003723 RNA binding IEP HCCA
MF GO:0003899 DNA-directed 5'-3' RNA polymerase activity IEP HCCA
MF GO:0003954 NADH dehydrogenase activity IEP HCCA
MF GO:0003955 NAD(P)H dehydrogenase (quinone) activity IEP HCCA
MF GO:0005215 transporter activity IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0005515 protein binding IEP HCCA
BP GO:0006139 nucleobase-containing compound metabolic process IEP HCCA
BP GO:0006163 purine nucleotide metabolic process IEP HCCA
BP GO:0006164 purine nucleotide biosynthetic process IEP HCCA
BP GO:0006351 DNA-templated transcription IEP HCCA
BP GO:0006397 mRNA processing IEP HCCA
BP GO:0006725 cellular aromatic compound metabolic process IEP HCCA
BP GO:0006753 nucleoside phosphate metabolic process IEP HCCA
BP GO:0006754 ATP biosynthetic process IEP HCCA
BP GO:0006807 nitrogen compound metabolic process IEP HCCA
BP GO:0006811 monoatomic ion transport IEP HCCA
BP GO:0006812 monoatomic cation transport IEP HCCA
MF GO:0008137 NADH dehydrogenase (ubiquinone) activity IEP HCCA
BP GO:0008150 biological_process IEP HCCA
BP GO:0008152 metabolic process IEP HCCA
MF GO:0009055 electron transfer activity IEP HCCA
BP GO:0009058 biosynthetic process IEP HCCA
BP GO:0009059 macromolecule biosynthetic process IEP HCCA
BP GO:0009117 nucleotide metabolic process IEP HCCA
BP GO:0009141 nucleoside triphosphate metabolic process IEP HCCA
BP GO:0009142 nucleoside triphosphate biosynthetic process IEP HCCA
BP GO:0009144 purine nucleoside triphosphate metabolic process IEP HCCA
BP GO:0009145 purine nucleoside triphosphate biosynthetic process IEP HCCA
BP GO:0009150 purine ribonucleotide metabolic process IEP HCCA
BP GO:0009152 purine ribonucleotide biosynthetic process IEP HCCA
BP GO:0009165 nucleotide biosynthetic process IEP HCCA
BP GO:0009199 ribonucleoside triphosphate metabolic process IEP HCCA
BP GO:0009201 ribonucleoside triphosphate biosynthetic process IEP HCCA
BP GO:0009205 purine ribonucleoside triphosphate metabolic process IEP HCCA
BP GO:0009206 purine ribonucleoside triphosphate biosynthetic process IEP HCCA
BP GO:0009259 ribonucleotide metabolic process IEP HCCA
BP GO:0009260 ribonucleotide biosynthetic process IEP HCCA
CC GO:0009521 photosystem IEP HCCA
CC GO:0009522 photosystem I IEP HCCA
CC GO:0009523 photosystem II IEP HCCA
CC GO:0009539 photosystem II reaction center IEP HCCA
CC GO:0009579 thylakoid IEP HCCA
BP GO:0009987 cellular process IEP HCCA
MF GO:0015399 primary active transmembrane transporter activity IEP HCCA
MF GO:0015453 oxidoreduction-driven active transmembrane transporter activity IEP HCCA
BP GO:0015979 photosynthesis IEP HCCA
BP GO:0015986 proton motive force-driven ATP synthesis IEP HCCA
BP GO:0016070 RNA metabolic process IEP HCCA
BP GO:0016071 mRNA metabolic process IEP HCCA
MF GO:0016491 oxidoreductase activity IEP HCCA
MF GO:0016651 oxidoreductase activity, acting on NAD(P)H IEP HCCA
MF GO:0016655 oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor IEP HCCA
MF GO:0017076 purine nucleotide binding IEP HCCA
BP GO:0018130 heterocycle biosynthetic process IEP HCCA
BP GO:0019438 aromatic compound biosynthetic process IEP HCCA
BP GO:0019637 organophosphate metabolic process IEP HCCA
BP GO:0019693 ribose phosphate metabolic process IEP HCCA
MF GO:0019843 rRNA binding IEP HCCA
MF GO:0022804 active transmembrane transporter activity IEP HCCA
MF GO:0022857 transmembrane transporter activity IEP HCCA
MF GO:0030554 adenyl nucleotide binding IEP HCCA
CC GO:0031361 obsolete integral component of thylakoid membrane IEP HCCA
CC GO:0032991 protein-containing complex IEP HCCA
MF GO:0034062 5'-3' RNA polymerase activity IEP HCCA
BP GO:0034220 monoatomic ion transmembrane transport IEP HCCA
BP GO:0034641 cellular nitrogen compound metabolic process IEP HCCA
BP GO:0034654 nucleobase-containing compound biosynthetic process IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
CC GO:0043226 organelle IEP HCCA
CC GO:0043228 non-membrane-bounded organelle IEP HCCA
CC GO:0043229 intracellular organelle IEP HCCA
CC GO:0043232 intracellular non-membrane-bounded organelle IEP HCCA
BP GO:0044237 cellular metabolic process IEP HCCA
BP GO:0044249 cellular biosynthetic process IEP HCCA
BP GO:0044271 cellular nitrogen compound biosynthetic process IEP HCCA
BP GO:0044281 small molecule metabolic process IEP HCCA
BP GO:0046034 ATP metabolic process IEP HCCA
BP GO:0046390 ribose phosphate biosynthetic process IEP HCCA
BP GO:0046483 heterocycle metabolic process IEP HCCA
MF GO:0048038 quinone binding IEP HCCA
MF GO:0050136 NADH dehydrogenase (quinone) activity IEP HCCA
MF GO:0051287 NAD binding IEP HCCA
BP GO:0055085 transmembrane transport IEP HCCA
BP GO:0055086 nucleobase-containing small molecule metabolic process IEP HCCA
BP GO:0055114 obsolete oxidation-reduction process IEP HCCA
BP GO:0072521 purine-containing compound metabolic process IEP HCCA
BP GO:0072522 purine-containing compound biosynthetic process IEP HCCA
BP GO:0090304 nucleic acid metabolic process IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
BP GO:0097659 nucleic acid-templated transcription IEP HCCA
MF GO:0097747 RNA polymerase activity IEP HCCA
BP GO:0098655 monoatomic cation transmembrane transport IEP HCCA
BP GO:0098660 inorganic ion transmembrane transport IEP HCCA
BP GO:0098662 inorganic cation transmembrane transport IEP HCCA
CC GO:0098796 membrane protein complex IEP HCCA
BP GO:1901135 carbohydrate derivative metabolic process IEP HCCA
BP GO:1901137 carbohydrate derivative biosynthetic process IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA
BP GO:1901293 nucleoside phosphate biosynthetic process IEP HCCA
BP GO:1901360 organic cyclic compound metabolic process IEP HCCA
BP GO:1901362 organic cyclic compound biosynthetic process IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
BP GO:1901566 organonitrogen compound biosynthetic process IEP HCCA
BP GO:1901576 organic substance biosynthetic process IEP HCCA
BP GO:1902600 proton transmembrane transport IEP HCCA
InterPro domains Description Start Stop
IPR001750 ND/Mrp_mem 131 413
No external refs found!