1. Home
  2. Species
  3. Oryza sativa
  4. Sequence
  5. LOC_Os06g48680.1

LOC_Os06g48680.1 (LOC_Os06g48680)


Aliases : LOC_Os06g48680

Description : no hits & (original description: none)


Gene families : OG0000091 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000091_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os06g48680.1
Cluster HCCA: Cluster_10

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00105p00148840 evm_27.TU.AmTr_v1... No description available 0.04 OrthoFinder output from all 47 species
AMTR_s00105p00150760 evm_27.TU.AmTr_v1... No description available 0.04 OrthoFinder output from all 47 species
AT2G23690 No alias unknown protein; FUNCTIONS IN: molecular_function... 0.03 OrthoFinder output from all 47 species
AT3G03280 No alias unknown protein; FUNCTIONS IN: molecular_function... 0.02 OrthoFinder output from all 47 species
AT4G02090 No alias unknown protein; FUNCTIONS IN: molecular_function... 0.04 OrthoFinder output from all 47 species
AT5G17350 No alias unknown protein; FUNCTIONS IN: molecular_function... 0.02 OrthoFinder output from all 47 species
Ala_g05409 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g12069 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Als_g58261 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aob_g16363 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g03142 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g04653 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g57274 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g58581 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene34873.t1 Aspi01Gene34873 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene36873.t1 Aspi01Gene36873 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene36878.t1 Aspi01Gene36878 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene36890.t1 Aspi01Gene36890 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene36930.t1 Aspi01Gene36930 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene36948.t1 Aspi01Gene36948 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene68688.t1 Aspi01Gene68688 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene68695.t1 Aspi01Gene68695 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene68696.t1 Aspi01Gene68696 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene68698.t1 Aspi01Gene68698 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene68699.t1 Aspi01Gene68699 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene68702.t1 Aspi01Gene68702 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene68704.t1 Aspi01Gene68704 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene68705.t1 Aspi01Gene68705 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene68706.t1 Aspi01Gene68706 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene68707.t1 Aspi01Gene68707 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene68716.t1 Aspi01Gene68716 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene68717.t1 Aspi01Gene68717 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene68718.t1 Aspi01Gene68718 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene68719.t1 Aspi01Gene68719 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene68724.t1 Aspi01Gene68724 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene68725.t1 Aspi01Gene68725 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene68758.t1 Aspi01Gene68758 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0083.g038858 No alias not classified & original description: CDS=1-924 0.02 OrthoFinder output from all 47 species
Cba_g59870 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ceric.13G010500.1 Ceric.13G010500 not classified & original description: pacid=50635479... 0.05 OrthoFinder output from all 47 species
Ceric.14G027400.1 Ceric.14G027400 not classified & original description: pacid=50633616... 0.05 OrthoFinder output from all 47 species
Ceric.14G096600.1 Ceric.14G096600 not classified & original description: pacid=50634393... 0.03 OrthoFinder output from all 47 species
Ceric.14G096700.1 Ceric.14G096700 not classified & original description: pacid=50634186... 0.05 OrthoFinder output from all 47 species
Ceric.16G044800.1 Ceric.16G044800 not classified & original description: pacid=50590057... 0.03 OrthoFinder output from all 47 species
Ceric.16G045200.1 Ceric.16G045200 not classified & original description: pacid=50588981... 0.05 OrthoFinder output from all 47 species
Ceric.1Z035600.1 Ceric.1Z035600 not classified & original description: pacid=50602495... 0.02 OrthoFinder output from all 47 species
Ceric.26G065100.1 Ceric.26G065100 not classified & original description: pacid=50599287... 0.02 OrthoFinder output from all 47 species
Ceric.29G014700.1 Ceric.29G014700 not classified & original description: pacid=50624719... 0.04 OrthoFinder output from all 47 species
Dac_g19010 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dac_g21988 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dac_g27477 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dac_g34282 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dac_g37617 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dac_g43546 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g00777 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g15217 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g20801 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g51696 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dde_g26614 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g40249 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g04393 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g21830 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ehy_g30502 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01003765001 No alias STS14 protein OS=Solanum tuberosum 0.03 OrthoFinder output from all 47 species
Gb_05762 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Gb_35301 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
LOC_Os01g19880.1 LOC_Os01g19880 no hits & (original description: none) 0.06 OrthoFinder output from all 47 species
LOC_Os02g09970.1 LOC_Os02g09970 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
LOC_Os03g52940.1 LOC_Os03g52940 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
LOC_Os03g55880.1 LOC_Os03g55880 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Len_g25446 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Len_g35642 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g22448 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
MA_10430658g0010 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
MA_27857g0010 No alias no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
MA_3445296g0010 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
MA_76101g0010 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
MA_9973g0010 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Mp4g19320.1 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Msp_g29597 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g09883 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ore_g11139 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g16597 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g16598 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g24294 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g26360 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g38664 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g38665 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g15482 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g21469 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Ppi_g17241 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g59843 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0144.g022943 No alias not classified & original description: CDS=786-1670 0.02 OrthoFinder output from all 47 species
Solyc03g006160.1.1 Solyc03g006160 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Solyc03g034410.1.1 Solyc03g034410 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Solyc04g007580.1.1 Solyc04g007580 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Solyc04g082960.1.1 Solyc04g082960 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Spa_g02969 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g09614 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g18211 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g21048 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g48362 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g04332 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Zm00001e005612_P001 Zm00001e005612 no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
Zm00001e013167_P001 Zm00001e013167 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Zm00001e019759_P001 Zm00001e019759 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Zm00001e026461_P001 Zm00001e026461 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Zm00001e030501_P001 Zm00001e030501 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0016829 lyase activity IEP HCCA
MF GO:0016840 carbon-nitrogen lyase activity IEP HCCA
MF GO:0016843 amine-lyase activity IEP HCCA
MF GO:0016844 strictosidine synthase activity IEP HCCA
MF GO:0043169 cation binding IEP HCCA
MF GO:0046872 metal ion binding IEP HCCA
InterPro domains Description Start Stop
IPR025322 PADRE_dom 1 176
No external refs found!