LOC_Os06g48700.1 (LOC_Os06g48700)


Aliases : LOC_Os06g48700

Description : no description available(sp|q65xs5|bc10_orysj : 190.0)


Gene families : OG0000231 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000231_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os06g48700.1

Target Alias Description ECC score Gene Family Method Actions
AT1G62305 No alias Core-2/I-branching... 0.02 OrthoFinder output from all 47 species
AT5G57270 No alias Core-2/I-branching... 0.03 OrthoFinder output from all 47 species
Aspi01Gene19107.t1 Aspi01Gene19107 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ceric.04G047000.1 Ceric.04G047000 not classified & original description: pacid=50631170... 0.03 OrthoFinder output from all 47 species
Len_g33258 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Mp6g05340.1 No alias no description available(sp|q65xs5|bc10_orysj : 340.0) 0.03 OrthoFinder output from all 47 species
Ppi_g08730 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Zm00001e013168_P002 Zm00001e013168 no description available(sp|q65xs5|bc10_orysj : 192.0) 0.05 OrthoFinder output from all 47 species
Zm00001e025120_P001 Zm00001e025120 no description available(sp|q65xs5|bc10_orysj : 172.0) 0.04 OrthoFinder output from all 47 species
Zm00001e030236_P001 Zm00001e030236 no description available(sp|q65xs5|bc10_orysj : 184.0) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
CC GO:0016020 membrane IEA Interproscan
Type GO Term Name Evidence Source
MF GO:0004175 endopeptidase activity IEP HCCA
MF GO:0004222 metalloendopeptidase activity IEP HCCA
MF GO:0005048 signal sequence binding IEP HCCA
BP GO:0006621 protein retention in ER lumen IEP HCCA
BP GO:0006886 intracellular protein transport IEP HCCA
BP GO:0008104 protein localization IEP HCCA
MF GO:0008237 metallopeptidase activity IEP HCCA
BP GO:0015031 protein transport IEP HCCA
BP GO:0032507 maintenance of protein location in cell IEP HCCA
BP GO:0033036 macromolecule localization IEP HCCA
MF GO:0033218 amide binding IEP HCCA
BP GO:0035437 maintenance of protein localization in endoplasmic reticulum IEP HCCA
MF GO:0042277 peptide binding IEP HCCA
BP GO:0045184 establishment of protein localization IEP HCCA
BP GO:0045185 maintenance of protein location IEP HCCA
BP GO:0046907 intracellular transport IEP HCCA
MF GO:0046923 ER retention sequence binding IEP HCCA
BP GO:0051179 localization IEP HCCA
BP GO:0051235 maintenance of location IEP HCCA
BP GO:0051641 cellular localization IEP HCCA
BP GO:0051649 establishment of localization in cell IEP HCCA
BP GO:0051651 maintenance of location in cell IEP HCCA
BP GO:0070727 cellular macromolecule localization IEP HCCA
BP GO:0071702 organic substance transport IEP HCCA
BP GO:0071705 nitrogen compound transport IEP HCCA
BP GO:0072595 maintenance of protein localization in organelle IEP HCCA
InterPro domains Description Start Stop
IPR003406 Glyco_trans_14 87 316
No external refs found!