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  5. LOC_Os07g01140.1

LOC_Os07g01140.1 (ATBPM3, BPM3, LOC_Os07g01140)


Aliases : ATBPM3, BPM3, LOC_Os07g01140

Description : BTB/POZ and MATH domain-containing protein 3 OS=Arabidopsis thaliana (sp|o22286|bpm3_arath : 457.0)


Gene families : OG0000564 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000564_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os07g01140.1

Target Alias Description ECC score Gene Family Method Actions
Adi_g024011 ATBPM2, BPM2 substrate adaptor *(BPM) of CUL3-BTB E3 ubiquitin ligase... 0.03 OrthoFinder output from all 47 species
Adi_g058866 BPM4, ATBPM4 substrate adaptor *(BPM) of CUL3-BTB E3 ubiquitin ligase... 0.02 OrthoFinder output from all 47 species
Adi_g083226 BPM4, ATBPM4 substrate adaptor *(BPM) of CUL3-BTB E3 ubiquitin ligase... 0.03 OrthoFinder output from all 47 species
Dcu_g04769 ATBPM2, BPM2 substrate adaptor *(BPM) of CUL3-BTB E3 ubiquitin ligase... 0.02 OrthoFinder output from all 47 species
GSVIVT01016478001 ATBPM3, BPM3 BTB/POZ and MATH domain-containing protein 3... 0.03 OrthoFinder output from all 47 species
GSVIVT01037518001 BPM4, ATBPM4 BTB/POZ and MATH domain-containing protein 4... 0.03 OrthoFinder output from all 47 species
Len_g05278 ATBPM2, BPM2 substrate adaptor *(BPM) of CUL3-BTB E3 ubiquitin ligase... 0.03 OrthoFinder output from all 47 species
Lfl_g01716 BPM4, ATBPM4 substrate adaptor *(BPM) of CUL3-BTB E3 ubiquitin ligase... 0.02 OrthoFinder output from all 47 species
MA_536g0010 BPM4, ATBPM4 BTB/POZ and MATH domain-containing protein 4... 0.03 OrthoFinder output from all 47 species
Msp_g16795 BPM4, ATBPM4 substrate adaptor *(BPM) of CUL3-BTB E3 ubiquitin ligase... 0.02 OrthoFinder output from all 47 species
Nbi_g31771 ATBPM2, BPM2 substrate adaptor *(BPM) of CUL3-BTB E3 ubiquitin ligase... 0.04 OrthoFinder output from all 47 species
Pir_g57067 ATBPM2, BPM2 substrate adaptor *(BPM) of CUL3-BTB E3 ubiquitin ligase... 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0011.g005256 BPM4, ATBPM4 not classified & original description: CDS=44-1702 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0023.g008840 BPM4, ATBPM4 substrate adaptor *(BPM) of CUL3-BTB E3 ubiquitin ligase... 0.02 OrthoFinder output from all 47 species
Smo267336 ATBPM2, BPM2 BTB/POZ and MATH domain-containing protein 2... 0.03 OrthoFinder output from all 47 species
Tin_g00915 ATBPM2, BPM2 substrate adaptor *(BPM) of CUL3-BTB E3 ubiquiTin ligase... 0.03 OrthoFinder output from all 47 species
Tin_g06545 BPM4, ATBPM4 substrate adaptor *(BPM) of CUL3-BTB E3 ubiquiTin ligase... 0.03 OrthoFinder output from all 47 species
Zm00001e004895_P001 ATBPM2, BPM2,... BTB/POZ and MATH domain-containing protein 1... 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003690 double-stranded DNA binding IEP HCCA
MF GO:0003723 RNA binding IEP HCCA
MF GO:0003899 DNA-directed 5'-3' RNA polymerase activity IEP HCCA
BP GO:0006351 DNA-templated transcription IEP HCCA
MF GO:0016779 nucleotidyltransferase activity IEP HCCA
MF GO:0034062 5'-3' RNA polymerase activity IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
BP GO:0097659 nucleic acid-templated transcription IEP HCCA
MF GO:0097747 RNA polymerase activity IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
InterPro domains Description Start Stop
IPR000210 BTB/POZ_dom 176 293
No external refs found!