LOC_Os07g03600.1 (LOC_Os07g03600)


Aliases : LOC_Os07g03600

Description : Pathogenesis-related protein PRB1-2 OS=Hordeum vulgare (sp|p35792|pr12_horvu : 105.0)


Gene families : OG0000174 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000174_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os07g03600.1

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00019p00200490 evm_27.TU.AmTr_v1... Pathogenesis-related protein PR-1 OS=Medicago truncatula 0.02 OrthoFinder output from all 47 species
AMTR_s00019p00200890 evm_27.TU.AmTr_v1... Pathogenesis-related protein PR-1 OS=Medicago truncatula 0.02 OrthoFinder output from all 47 species
AT1G50050 No alias CAP (Cysteine-rich secretory proteins, Antigen 5, and... 0.04 OrthoFinder output from all 47 species
AT2G14610 ATPR1, PR1, PR 1 pathogenesis-related gene 1 0.02 OrthoFinder output from all 47 species
AT2G19990 PR-1-LIKE pathogenesis-related protein-1-like 0.02 OrthoFinder output from all 47 species
AT4G07820 No alias CAP (Cysteine-rich secretory proteins, Antigen 5, and... 0.03 OrthoFinder output from all 47 species
AT4G25780 No alias CAP (Cysteine-rich secretory proteins, Antigen 5, and... 0.02 OrthoFinder output from all 47 species
AT4G31470 No alias CAP (Cysteine-rich secretory proteins, Antigen 5, and... 0.03 OrthoFinder output from all 47 species
Ala_g21397 No alias CAPE precursor polypeptide & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene14794.t1 Aspi01Gene14794 CAPE precursor polypeptide & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g13654 No alias CAPE precursor polypeptide & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g25605 No alias CAPE precursor polypeptide & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01003762001 No alias STS14 protein OS=Solanum tuberosum 0.02 OrthoFinder output from all 47 species
GSVIVT01037000001 ATPR1, PR1, PR 1 Basic form of pathogenesis-related protein 1 OS=Nicotiana tabacum 0.03 OrthoFinder output from all 47 species
GSVIVT01037011001 No alias Basic form of pathogenesis-related protein 1 OS=Nicotiana tabacum 0.04 OrthoFinder output from all 47 species
GSVIVT01037014001 No alias Basic form of pathogenesis-related protein 1 OS=Nicotiana tabacum 0.04 OrthoFinder output from all 47 species
Gb_11047 No alias Pathogenesis-related protein 1A OS=Nicotiana tabacum... 0.03 OrthoFinder output from all 47 species
Gb_13683 No alias Pathogenesis-related protein PR-1 OS=Medicago truncatula... 0.03 OrthoFinder output from all 47 species
Gb_20955 No alias Pathogenesis-related protein PRB1-2 OS=Hordeum vulgare... 0.04 OrthoFinder output from all 47 species
LOC_Os01g28450.1 ATPR1, PR1, PR... Pathogenesis-related protein 1 OS=Hordeum vulgare... 0.06 OrthoFinder output from all 47 species
LOC_Os02g27300.1 LOC_Os02g27300 Pathogenesis-related protein PRMS OS=Zea mays... 0.05 OrthoFinder output from all 47 species
LOC_Os02g27310.1 LOC_Os02g27310 Cysteine-rich receptor-like protein kinase 6 OS=Oryza... 0.06 OrthoFinder output from all 47 species
LOC_Os04g22210.1 PRB1, ATPRB1,... Pathogenesis-related protein PR-1 OS=Medicago truncatula... 0.04 OrthoFinder output from all 47 species
LOC_Os07g03610.1 ATPR1, PR1, PR... Pathogenesis-related protein 1 OS=Hordeum vulgare... 0.05 OrthoFinder output from all 47 species
LOC_Os07g03620.1 ATPR1, PR1, PR... Pathogenesis-related protein PRB1-3 OS=Hordeum vulgare... 0.04 OrthoFinder output from all 47 species
LOC_Os07g03680.1 LOC_Os07g03680 Pathogenesis-related protein 1B OS=Nicotiana tabacum... 0.06 OrthoFinder output from all 47 species
MA_10270775g0010 No alias Pathogenesis-related protein 1B OS=Nicotiana tabacum... 0.03 OrthoFinder output from all 47 species
MA_10428480g0010 No alias Basic form of pathogenesis-related protein 1... 0.02 OrthoFinder output from all 47 species
Mp3g14100.1 ATPR1, PR1, PR 1 Pathogenesis-related protein 1 OS=Arabidopsis thaliana... 0.01 OrthoFinder output from all 47 species
Ore_g05517 PRB1, ATPRB1 CAPE precursor polypeptide & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g14007 No alias CAPE precursor polypeptide & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g59472 No alias CAPE precursor polypeptide & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0015.g006515 No alias CAPE precursor polypeptide & original description: CDS=1-528 0.02 OrthoFinder output from all 47 species
Smo76987 No alias Pathogenesis-related protein PR-1 type OS=Sambucus nigra 0.02 OrthoFinder output from all 47 species
Solyc01g106605.1.1 Solyc01g106605 Pathogenesis-related protein 1A1 OS=Solanum lycopersicum... 0.03 OrthoFinder output from all 47 species
Zm00001e002028_P001 ATPR1, PR1, PR... Pathogenesis-related protein PRMS OS=Zea mays... 0.03 OrthoFinder output from all 47 species
Zm00001e011196_P001 Zm00001e011196 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Zm00001e016073_P001 Zm00001e016073 Pathogenesis-related protein PR-1 OS=Medicago truncatula... 0.02 OrthoFinder output from all 47 species
Zm00001e023732_P001 Zm00001e023732 Pathogenesis-related protein 1 OS=Hordeum vulgare... 0.03 OrthoFinder output from all 47 species
Zm00001e032757_P001 ATPR1, PR1, PR... Pathogenesis-related protein PRMS OS=Zea mays... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0003993 acid phosphatase activity IEP HCCA
MF GO:0005516 calmodulin binding IEP HCCA
BP GO:0006081 cellular aldehyde metabolic process IEP HCCA
BP GO:0006090 pyruvate metabolic process IEP HCCA
BP GO:0006644 phospholipid metabolic process IEP HCCA
BP GO:0008610 lipid biosynthetic process IEP HCCA
BP GO:0008654 phospholipid biosynthetic process IEP HCCA
BP GO:0009240 isopentenyl diphosphate biosynthetic process IEP HCCA
MF GO:0016725 oxidoreductase activity, acting on CH or CH2 groups IEP HCCA
MF GO:0016726 oxidoreductase activity, acting on CH or CH2 groups, NAD or NADP as acceptor IEP HCCA
MF GO:0016791 phosphatase activity IEP HCCA
BP GO:0019288 isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway IEP HCCA
BP GO:0019682 glyceraldehyde-3-phosphate metabolic process IEP HCCA
BP GO:0032787 monocarboxylic acid metabolic process IEP HCCA
MF GO:0042578 phosphoric ester hydrolase activity IEP HCCA
MF GO:0043167 ion binding IEP HCCA
BP GO:0044255 cellular lipid metabolic process IEP HCCA
BP GO:0046490 isopentenyl diphosphate metabolic process IEP HCCA
BP GO:0050992 dimethylallyl diphosphate biosynthetic process IEP HCCA
BP GO:0050993 dimethylallyl diphosphate metabolic process IEP HCCA
MF GO:0051745 4-hydroxy-3-methylbut-2-en-1-yl diphosphate reductase activity IEP HCCA
BP GO:0090407 organophosphate biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR014044 CAP_domain 33 164
No external refs found!