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  5. LOC_Os07g04530.1

LOC_Os07g04530.1 (LOC_Os07g04530)


Aliases : LOC_Os07g04530

Description : susceptibility factor (EXA1)


Gene families : OG0000708 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000708_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os07g04530.1

Target Alias Description ECC score Gene Family Method Actions
AT1G24300 No alias GYF domain-containing protein 0.03 OrthoFinder output from all 47 species
AT1G27430 No alias GYF domain-containing protein 0.03 OrthoFinder output from all 47 species
Aev_g48838 No alias susceptibility factor *(EXA1) & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g70568 No alias susceptibility factor *(EXA1) & original description: none 0.02 OrthoFinder output from all 47 species
Cpa|evm.model.tig00000704.56 No alias No description available 0.01 OrthoFinder output from all 47 species
GSVIVT01000922001 No alias No description available 0.03 OrthoFinder output from all 47 species
Len_g14158 No alias susceptibility factor *(EXA1) & original description: none 0.02 OrthoFinder output from all 47 species
Len_g20603 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g16118 No alias susceptibility factor *(EXA1) & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g23458 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g29247 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g17159 No alias susceptibility factor *(EXA1) & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e028423_P003 Zm00001e028423 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Zm00001e028424_P001 Zm00001e028424 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004842 ubiquitin-protein transferase activity IEP HCCA
MF GO:0019787 ubiquitin-like protein transferase activity IEP HCCA
MF GO:0030246 carbohydrate binding IEP HCCA
MF GO:0030247 polysaccharide binding IEP HCCA
InterPro domains Description Start Stop
IPR003169 GYF 490 525
No external refs found!