Aliases : ASK2, SKP1B, LOC_Os07g05150
Description : target protein binding component SKP1/ASK1 of SKP1-CUL1-FBX (SCF) E3 ligase complexes
Gene families : OG0000379 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000379_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: LOC_Os07g05150.1 | |
| Cluster | HCCA: Cluster_85 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AT2G03190 | ASK16, SK16 | SKP1-like 16 | 0.03 | OrthoFinder output from all 47 species | |
| AT2G25700 | ASK3, SK3 | SKP1-like 3 | 0.04 | OrthoFinder output from all 47 species | |
| AT3G21830 | SK8, ASK8 | SKP1-like 8 | 0.02 | OrthoFinder output from all 47 species | |
| AT3G21840 | ASK7, SK7 | SKP1-like 7 | 0.03 | OrthoFinder output from all 47 species | |
| AT4G34470 | SK12, ASK12 | SKP1-like 12 | 0.1 | OrthoFinder output from all 47 species | |
| Azfi_s0003.g007582 | No alias | not classified & original description: CDS=203-667 | 0.01 | OrthoFinder output from all 47 species | |
| Ceric.20G070900.1 | ASK1, ATSKP1,... | ASK-type linker component of SCF E3 ubiquitin ligase... | 0.05 | OrthoFinder output from all 47 species | |
| Ceric.20G071200.1 | ASK1, ATSKP1,... | ASK-type linker component of SCF E3 ubiquitin ligase... | 0.02 | OrthoFinder output from all 47 species | |
| Ceric.20G071800.1 | ASK1, ATSKP1,... | ASK-type linker component of SCF E3 ubiquitin ligase... | 0.03 | OrthoFinder output from all 47 species | |
| Ceric.20G072300.1 | ASK2, SKP1B,... | ASK-type linker component of SCF E3 ubiquitin ligase... | 0.05 | OrthoFinder output from all 47 species | |
| Dac_g39230 | ASK1, ATSKP1,... | ASK-type linker component of SCF E3 ubiquitin ligase... | 0.02 | OrthoFinder output from all 47 species | |
| Dac_g41160 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Gb_41410 | ASK1, ATSKP1,... | target protein binding component SKP1/ASK1 of... | 0.01 | OrthoFinder output from all 47 species | |
| LOC_Os09g10200.1 | ASK1, ATSKP1,... | target protein binding component SKP1/ASK1 of... | 0.01 | OrthoFinder output from all 47 species | |
| MA_121410g0010 | ASK1, ATSKP1,... | target protein binding component SKP1/ASK1 of... | 0.05 | OrthoFinder output from all 47 species | |
| Mp2g05290.1 | No alias | no hits & (original description: none) | 0.03 | OrthoFinder output from all 47 species | |
| Nbi_g29347 | ASK2, SKP1B | ASK-type linker component of SCF E3 ubiquitin ligase... | 0.02 | OrthoFinder output from all 47 species | |
| Pir_g51363 | ASK1, ATSKP1,... | ASK-type linker component of SCF E3 ubiquitin ligase... | 0.02 | OrthoFinder output from all 47 species | |
| Ppi_g09622 | ASK2, SKP1B | ASK-type linker component of SCF E3 ubiquitin ligase... | 0.06 | OrthoFinder output from all 47 species | |
| Smo98727 | ASK1, ATSKP1,... | Protein degradation.peptide tagging.Ubiquitin... | 0.03 | OrthoFinder output from all 47 species | |
| Solyc10g055580.2.1 | ASK2, SKP1B,... | target protein binding component SKP1/ASK1 of... | 0.02 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| BP | GO:0006511 | ubiquitin-dependent protein catabolic process | IEA | Interproscan |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003674 | molecular_function | IEP | HCCA |
| MF | GO:0003824 | catalytic activity | IEP | HCCA |
| MF | GO:0005506 | iron ion binding | IEP | HCCA |
| BP | GO:0006417 | regulation of translation | IEP | HCCA |
| BP | GO:0009890 | negative regulation of biosynthetic process | IEP | HCCA |
| BP | GO:0009892 | negative regulation of metabolic process | IEP | HCCA |
| BP | GO:0010558 | negative regulation of macromolecule biosynthetic process | IEP | HCCA |
| BP | GO:0010605 | negative regulation of macromolecule metabolic process | IEP | HCCA |
| BP | GO:0010608 | post-transcriptional regulation of gene expression | IEP | HCCA |
| BP | GO:0010629 | negative regulation of gene expression | IEP | HCCA |
| MF | GO:0016491 | oxidoreductase activity | IEP | HCCA |
| MF | GO:0016705 | oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen | IEP | HCCA |
| MF | GO:0016799 | hydrolase activity, hydrolyzing N-glycosyl compounds | IEP | HCCA |
| MF | GO:0016840 | carbon-nitrogen lyase activity | IEP | HCCA |
| MF | GO:0016843 | amine-lyase activity | IEP | HCCA |
| MF | GO:0016844 | strictosidine synthase activity | IEP | HCCA |
| BP | GO:0017148 | negative regulation of translation | IEP | HCCA |
| MF | GO:0020037 | heme binding | IEP | HCCA |
| MF | GO:0030597 | RNA glycosylase activity | IEP | HCCA |
| MF | GO:0030598 | rRNA N-glycosylase activity | IEP | HCCA |
| BP | GO:0031324 | negative regulation of cellular metabolic process | IEP | HCCA |
| BP | GO:0031327 | negative regulation of cellular biosynthetic process | IEP | HCCA |
| BP | GO:0034248 | regulation of amide metabolic process | IEP | HCCA |
| BP | GO:0034249 | negative regulation of amide metabolic process | IEP | HCCA |
| MF | GO:0046906 | tetrapyrrole binding | IEP | HCCA |
| MF | GO:0046914 | transition metal ion binding | IEP | HCCA |
| BP | GO:0048519 | negative regulation of biological process | IEP | HCCA |
| BP | GO:0048523 | negative regulation of cellular process | IEP | HCCA |
| BP | GO:0051172 | negative regulation of nitrogen compound metabolic process | IEP | HCCA |
| BP | GO:0051246 | regulation of protein metabolic process | IEP | HCCA |
| BP | GO:0051248 | negative regulation of protein metabolic process | IEP | HCCA |
| BP | GO:0055114 | obsolete oxidation-reduction process | IEP | HCCA |
| MF | GO:0140102 | catalytic activity, acting on a rRNA | IEP | HCCA |
| BP | GO:2000112 | regulation of cellular macromolecule biosynthetic process | IEP | HCCA |
| BP | GO:2000113 | negative regulation of cellular macromolecule biosynthetic process | IEP | HCCA |
| No external refs found! |
