LOC_Os07g05620.1 (SnRK3.23, CIPK23,...)

Aliases : SnRK3.23, CIPK23, ATCIPK23, LKS1, LOC_Os07g05620

Description : SNF1-related protein kinase (SnRK3)

Gene families : OG0000065 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)

Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: LOC_Os07g05620.1
Cluster	HCCA: Cluster_183

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00045p00096970	CIPK1, SnRK3.16,...	Protein modification.phosphorylation.CAMK kinase...	0.04	OrthoFinder output from all 47 species
AT1G30270	SnRK3.23,...	CBL-interacting protein kinase 23	0.04	OrthoFinder output from all 47 species
AT2G25090	SnRK3.18, CIPK16	CBL-interacting protein kinase 16	0.03	OrthoFinder output from all 47 species
AT5G45810	CIPK19, SnRK3.5	CBL-interacting protein kinase 19	0.03	OrthoFinder output from all 47 species
Adi_g054937	SnRK3.12, PKS6, CIPK9	EC_2.7 transferase transferring phosphorus-containing...	0.02	OrthoFinder output from all 47 species
Ala_g32969	SnRK3.23,...	EC_2.7 transferase transferring phosphorus-containing...	0.03	OrthoFinder output from all 47 species
Als_g02471	CIPK3, SnRK3.17	EC_2.7 transferase transferring phosphorus-containing...	0.02	OrthoFinder output from all 47 species
Als_g21609	CIPK3, SnRK3.17	EC_2.7 transferase transferring phosphorus-containing...	0.02	OrthoFinder output from all 47 species
Als_g24215	KIN10, SNRK1.1, AKIN10	EC_2.7 transferase transferring phosphorus-containing...	0.02	OrthoFinder output from all 47 species
Als_g24216	SNRK1.2, AKIN11,...	EC_2.7 transferase transferring phosphorus-containing...	0.02	OrthoFinder output from all 47 species
Als_g52274	SnRK3.23,...	EC_2.7 transferase transferring phosphorus-containing...	0.02	OrthoFinder output from all 47 species
Azfi_s0117.g046534	SnRK3.23,...	EC_2.7 transferase transferring phosphorus-containing...	0.03	OrthoFinder output from all 47 species
Cba_g23796	KIN10, SNRK1.1, AKIN10	EC_2.7 transferase transferring phosphorus-containing...	0.03	OrthoFinder output from all 47 species
Cba_g57988	CIPK3, SnRK3.17	EC_2.7 transferase transferring phosphorus-containing...	0.04	OrthoFinder output from all 47 species
Ceric.05G081700.1	SnRK3.23,...	EC_2.7 transferase transferring phosphorus-containing...	0.03	OrthoFinder output from all 47 species
Ceric.09G015000.1	SnRK3.23,...	EC_2.7 transferase transferring phosphorus-containing...	0.03	OrthoFinder output from all 47 species
Ceric.37G045000.1	KIN10, SNRK1.1,...	EC_2.7 transferase transferring phosphorus-containing...	0.02	OrthoFinder output from all 47 species
Cre04.g211600	KIN10, SNRK1.1, AKIN10	Multi-process regulation.SnRK1 metabolic regulator...	0.03	OrthoFinder output from all 47 species
Dde_g30784	KIN10, SNRK1.1, AKIN10	EC_2.7 transferase transferring phosphorus-containing...	0.02	OrthoFinder output from all 47 species
Ehy_g05820	CIPK3, SnRK3.17	EC_2.7 transferase transferring phosphorus-containing...	0.02	OrthoFinder output from all 47 species
Ehy_g06789	SnRK3.12, PKS6, CIPK9	EC_2.7 transferase transferring phosphorus-containing...	0.02	OrthoFinder output from all 47 species
GSVIVT01017690001	CIPK1, SnRK3.16	Protein modification.phosphorylation.CAMK kinase...	0.04	OrthoFinder output from all 47 species
Gb_16900	PKS18, CIPK20, SnRK3.6	SNF1-related protein kinase (SnRK3)	0.04	OrthoFinder output from all 47 species
Len_g56031	SnRK3.23,...	EC_2.7 transferase transferring phosphorus-containing...	0.03	OrthoFinder output from all 47 species
MA_10431492g0010	PKS18, CIPK20, SnRK3.6	SNF1-related protein kinase (SnRK3)	0.04	OrthoFinder output from all 47 species
MA_14540g0020	PKS18, CIPK20, SnRK3.6	SNF1-related protein kinase (SnRK3)	0.03	OrthoFinder output from all 47 species
Pir_g01902	SnRK3.12, PKS6, CIPK9	EC_2.7 transferase transferring phosphorus-containing...	0.02	OrthoFinder output from all 47 species
Pir_g18186	SnRK3.23,...	EC_2.7 transferase transferring phosphorus-containing...	0.03	OrthoFinder output from all 47 species
Ppi_g05048	SnRK3.23,...	EC_2.7 transferase transferring phosphorus-containing...	0.03	OrthoFinder output from all 47 species
Ppi_g14890	SnRK3.12, PKS6, CIPK9	EC_2.7 transferase transferring phosphorus-containing...	0.02	OrthoFinder output from all 47 species
Sacu_v1.1_s0109.g020493	CIPK3, SnRK3.17	not classified & original description: CDS=305-535	0.03	OrthoFinder output from all 47 species
Sam_g29872	No alias	EC_2.7 transferase transferring phosphorus-containing...	0.02	OrthoFinder output from all 47 species
Sam_g38895	No alias	EC_2.7 transferase transferring phosphorus-containing...	0.02	OrthoFinder output from all 47 species
Solyc03g115700.3.1	KIN10, SNRK1.1,...	catalytic subunit alpha of SNF1-related SnRK1 protein...	0.03	OrthoFinder output from all 47 species
Solyc06g007430.3.1	PKS2, CIPK10,...	SNF1-related protein kinase (SnRK3)	0.03	OrthoFinder output from all 47 species
Spa_g26592	CIPK3, SnRK3.17	EC_2.7 transferase transferring phosphorus-containing...	0.03	OrthoFinder output from all 47 species
Tin_g12914	KIN10, SNRK1.1, AKIN10	EC_2.7 transferase transferring phosphorus-containing...	0.02	OrthoFinder output from all 47 species
Zm00001e001502_P003	Zm00001e001502	SNF1-related protein kinase (SnRK3)	0.04	OrthoFinder output from all 47 species
Zm00001e001595_P001	PKS2, CIPK10,...	SNF1-related protein kinase (SnRK3)	0.03	OrthoFinder output from all 47 species
Zm00001e009309_P003	KIN10, SNRK1.1,...	catalytic subunit alpha of SNF1-related SnRK1 protein...	0.03	OrthoFinder output from all 47 species
Zm00001e010633_P001	CIPK3, SnRK3.17,...	CBL-interacting protein kinase 3 OS=Oryza sativa subsp....	0.04	OrthoFinder output from all 47 species
Zm00001e020847_P002	CIPK3, SnRK3.17,...	SNF1-related protein kinase (SnRK3)	0.03	OrthoFinder output from all 47 species
Zm00001e022467_P001	CIPK6, SIP3,...	SNF1-related protein kinase (SnRK3)	0.03	OrthoFinder output from all 47 species
Zm00001e024052_P002	CIPK3, SnRK3.17,...	SNF1-related protein kinase (SnRK3)	0.04	OrthoFinder output from all 47 species
Zm00001e030580_P001	SNRK3.11, SOS2,...	SNF1-related protein kinase (SnRK3). protein kinase (SOS2)	0.03	OrthoFinder output from all 47 species
Zm00001e035912_P001	Zm00001e035912	SNF1-related protein kinase (SnRK3)	0.03	OrthoFinder output from all 47 species
Zm00001e040362_P002	CIPK1, SnRK3.16,...	SNF1-related protein kinase (SnRK3)	0.04	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0004672	protein kinase activity	IEA	Interproscan
MF	GO:0005488	binding	None	Extended
MF	GO:0005524	ATP binding	IEA	Interproscan
BP	GO:0006468	protein phosphorylation	IEA	Interproscan
BP	GO:0006793	phosphorus metabolic process	None	Extended
BP	GO:0006796	phosphate-containing compound metabolic process	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0007165	signal transduction	IEA	Interproscan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
MF	GO:0016301	kinase activity	None	Extended
BP	GO:0016310	phosphorylation	None	Extended
MF	GO:0016740	transferase activity	None	Extended
MF	GO:0016772	transferase activity, transferring phosphorus-containing groups	None	Extended
MF	GO:0016773	phosphotransferase activity, alcohol group as acceptor	None	Extended
MF	GO:0017076	purine nucleotide binding	None	Extended
BP	GO:0019538	protein metabolic process	None	Extended
MF	GO:0030554	adenyl nucleotide binding	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032559	adenyl ribonucleotide binding	None	Extended
MF	GO:0035639	purine ribonucleoside triphosphate binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
BP	GO:0036211	protein modification process	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
BP	GO:0043412	macromolecule modification	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
MF	GO:0140096	catalytic activity, acting on a protein	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended

Toggle parental

Type	GO Term	Name	Evidence	Source
MF	GO:0005509	calcium ion binding	IEP	HCCA
MF	GO:0008168	methyltransferase activity	IEP	HCCA
MF	GO:0016462	pyrophosphatase activity	IEP	HCCA
MF	GO:0016741	transferase activity, transferring one-carbon groups	IEP	HCCA
MF	GO:0016817	hydrolase activity, acting on acid anhydrides	IEP	HCCA
MF	GO:0016818	hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides	IEP	HCCA
MF	GO:0016887	ATP hydrolysis activity	IEP	HCCA
MF	GO:0017111	ribonucleoside triphosphate phosphatase activity	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR000719	Prot_kinase_dom	13	268
IPR004041	NAF_dom	309	370

External Links

No external refs found!

LOC_Os07g05620.1 (SnRK3.23, CIPK23,...)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation