LOC_Os07g07470.1 (BCDH BETA1, LOC_Os07g07470)


Aliases : BCDH BETA1, LOC_Os07g07470

Description : subunit beta of E1 2-oxoisovalerate dehydrogenase subcomplex


Gene families : OG0006868 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0006868_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os07g07470.1

Target Alias Description ECC score Gene Family Method Actions
AT1G55510 BCDH BETA1 branched-chain alpha-keto acid decarboxylase E1 beta subunit 0.05 OrthoFinder output from all 47 species
AT3G13450 DIN4 Transketolase family protein 0.07 OrthoFinder output from all 47 species
Aop_g21279 DIN4 subunit beta of E1 subcomplex of 2-oxoisovalerate... 0.02 OrthoFinder output from all 47 species
Aspi01Gene63709.t1 DIN4, Aspi01Gene63709 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Azfi_s0257.g060580 DIN4 subunit beta of E1 subcomplex of 2-oxoisovalerate... 0.03 OrthoFinder output from all 47 species
Cre06.g311050 DIN4 Amino acid metabolism.degradation.branched-chain amino... 0.05 OrthoFinder output from all 47 species
Dac_g13708 DIN4 subunit beta of E1 subcomplex of 2-oxoisovalerate... 0.03 OrthoFinder output from all 47 species
Dcu_g02614 DIN4 subunit beta of E1 subcomplex of 2-oxoisovalerate... 0.03 OrthoFinder output from all 47 species
Dde_g07850 BCDH BETA1 subunit beta of E1 subcomplex of 2-oxoisovalerate... 0.02 OrthoFinder output from all 47 species
Len_g03205 BCDH BETA1 subunit beta of E1 subcomplex of 2-oxoisovalerate... 0.02 OrthoFinder output from all 47 species
Mp8g10430.1 DIN4 subunit beta of E1 2-oxoisovalerate dehydrogenase subcomplex 0.02 OrthoFinder output from all 47 species
Pir_g56593 DIN4 subunit beta of E1 subcomplex of 2-oxoisovalerate... 0.03 OrthoFinder output from all 47 species
Sam_g12988 No alias subunit beta of E1 subcomplex of 2-oxoisovalerate... 0.03 OrthoFinder output from all 47 species
Spa_g04158 DIN4 subunit beta of E1 subcomplex of 2-oxoisovalerate... 0.04 OrthoFinder output from all 47 species
Tin_g05450 DIN4 subunit beta of E1 subcomplex of 2-oxoisovalerate... 0.04 OrthoFinder output from all 47 species
Zm00001e011471_P001 BCDH BETA1,... subunit beta of E1 2-oxoisovalerate dehydrogenase subcomplex 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP HCCA
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0003857 3-hydroxyacyl-CoA dehydrogenase activity IEP HCCA
MF GO:0004411 homogentisate 1,2-dioxygenase activity IEP HCCA
MF GO:0004602 glutathione peroxidase activity IEP HCCA
MF GO:0005215 transporter activity IEP HCCA
BP GO:0006082 organic acid metabolic process IEP HCCA
BP GO:0006558 L-phenylalanine metabolic process IEP HCCA
BP GO:0006559 L-phenylalanine catabolic process IEP HCCA
BP GO:0006570 tyrosine metabolic process IEP HCCA
BP GO:0006629 lipid metabolic process IEP HCCA
BP GO:0006631 fatty acid metabolic process IEP HCCA
BP GO:0006810 transport IEP HCCA
BP GO:0009063 amino acid catabolic process IEP HCCA
BP GO:0009072 aromatic amino acid metabolic process IEP HCCA
BP GO:0009074 aromatic amino acid family catabolic process IEP HCCA
MF GO:0015095 magnesium ion transmembrane transporter activity IEP HCCA
BP GO:0015693 magnesium ion transport IEP HCCA
BP GO:0016054 organic acid catabolic process IEP HCCA
MF GO:0016462 pyrophosphatase activity IEP HCCA
MF GO:0016491 oxidoreductase activity IEP HCCA
MF GO:0016627 oxidoreductase activity, acting on the CH-CH group of donors IEP HCCA
MF GO:0016701 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen IEP HCCA
MF GO:0016702 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen IEP HCCA
MF GO:0016787 hydrolase activity IEP HCCA
MF GO:0016817 hydrolase activity, acting on acid anhydrides IEP HCCA
MF GO:0016818 hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides IEP HCCA
MF GO:0017111 ribonucleoside triphosphate phosphatase activity IEP HCCA
BP GO:0019439 aromatic compound catabolic process IEP HCCA
BP GO:0019752 carboxylic acid metabolic process IEP HCCA
MF GO:0022857 transmembrane transporter activity IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
MF GO:0043168 anion binding IEP HCCA
BP GO:0043436 oxoacid metabolic process IEP HCCA
BP GO:0044281 small molecule metabolic process IEP HCCA
BP GO:0044282 small molecule catabolic process IEP HCCA
BP GO:0046395 carboxylic acid catabolic process IEP HCCA
MF GO:0050660 flavin adenine dinucleotide binding IEP HCCA
BP GO:0051179 localization IEP HCCA
MF GO:0051213 dioxygenase activity IEP HCCA
BP GO:0051234 establishment of localization IEP HCCA
BP GO:0055114 obsolete oxidation-reduction process IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA
BP GO:1901361 organic cyclic compound catabolic process IEP HCCA
BP GO:1901565 organonitrogen compound catabolic process IEP HCCA
BP GO:1901605 alpha-amino acid metabolic process IEP HCCA
BP GO:1901606 alpha-amino acid catabolic process IEP HCCA
BP GO:1902221 erythrose 4-phosphate/phosphoenolpyruvate family amino acid metabolic process IEP HCCA
BP GO:1902222 erythrose 4-phosphate/phosphoenolpyruvate family amino acid catabolic process IEP HCCA
InterPro domains Description Start Stop
IPR005475 Transketolase-like_Pyr-bd 50 224
IPR033248 Transketolase_C 241 360
No external refs found!