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  5. LOC_Os07g12890.1

LOC_Os07g12890.1 (ZIP1, LOC_Os07g12890)


Aliases : ZIP1, LOC_Os07g12890

Description : metal cation transporter (ZIP)


Gene families : OG0000472 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000472_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os07g12890.1

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00007p00045670 ATZIP6, ZIP6,... Solute transport.carrier-mediated transport.ZIP... 0.04 OrthoFinder output from all 47 species
AMTR_s00032p00184330 ZIP7,... Solute transport.carrier-mediated transport.ZIP... 0.05 OrthoFinder output from all 47 species
AMTR_s00062p00183460 ZIP1,... Solute transport.carrier-mediated transport.ZIP... 0.05 OrthoFinder output from all 47 species
AMTR_s00062p00183790 ZIP1,... Solute transport.carrier-mediated transport.ZIP... 0.03 OrthoFinder output from all 47 species
AMTR_s00062p00183880 ZIP5,... Solute transport.carrier-mediated transport.ZIP... 0.03 OrthoFinder output from all 47 species
AMTR_s02000p00002390 ZIP10,... Solute transport.carrier-mediated transport.ZIP... 0.02 OrthoFinder output from all 47 species
AT1G60960 IRT3, ATIRT3 iron regulated transporter 3 0.04 OrthoFinder output from all 47 species
AT2G04032 ZIP7 zinc transporter 7 precursor 0.03 OrthoFinder output from all 47 species
Aev_g42847 IRT3, ATIRT3 metal cation transporter *(ZIP) & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g29259 ZIP1 metal cation transporter *(ZIP) & original description: none 0.02 OrthoFinder output from all 47 species
Als_g19920 ATZIP4, ZIP4 metal cation transporter *(ZIP) & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g14531 IRT3, ATIRT3 metal cation transporter *(ZIP) & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene27419.t1 ATZIP4, ZIP4,... metal cation transporter *(ZIP) & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0014.g013568 ZIP1 metal cation transporter *(ZIP) & original description: CDS=1-972 0.04 OrthoFinder output from all 47 species
Ceric.03G008200.1 ATZIP4, ZIP4,... metal cation transporter *(ZIP) & original description:... 0.02 OrthoFinder output from all 47 species
Ceric.05G078200.1 ATZIP4, ZIP4,... metal cation transporter *(ZIP) & original description:... 0.01 OrthoFinder output from all 47 species
Ceric.13G038400.1 ATZIP4, ZIP4,... metal cation transporter *(ZIP) & original description:... 0.03 OrthoFinder output from all 47 species
Ceric.14G032100.1 ATZIP4, ZIP4,... metal cation transporter *(ZIP) & original description:... 0.03 OrthoFinder output from all 47 species
Ceric.14G032300.1 ATZIP4, ZIP4,... metal cation transporter *(ZIP) & original description:... 0.03 OrthoFinder output from all 47 species
Ceric.39G001600.1 ATZIP4, ZIP4,... metal cation transporter *(ZIP) & original description:... 0.02 OrthoFinder output from all 47 species
Dde_g31389 ATZIP4, ZIP4 metal cation transporter *(ZIP) & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g03468 ATZIP4, ZIP4 metal cation transporter *(ZIP) & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g16998 ATZIP4, ZIP4 metal cation transporter *(ZIP) & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01012141001 ZIP1 Solute transport.carrier-mediated transport.ZIP... 0.01 OrthoFinder output from all 47 species
Gb_00356 ATZIP6, ZIP6 metal cation transporter (ZIP) 0.07 OrthoFinder output from all 47 species
MA_31095g0010 ATZIP4, ZIP4 metal cation transporter (ZIP) 0.03 OrthoFinder output from all 47 species
MA_842474g0010 ZIP5 metal cation transporter (ZIP) 0.02 OrthoFinder output from all 47 species
Nbi_g18185 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Pir_g29455 ATZIP4, ZIP4 metal cation transporter *(ZIP) & original description: none 0.02 OrthoFinder output from all 47 species
Pnu_g11827 ATZIP4, ZIP4 metal cation transporter *(ZIP) & original description: none 0.02 OrthoFinder output from all 47 species
Smo231997 ATZIP4, ZIP4 Solute transport.carrier-mediated transport.ZIP... 0.03 OrthoFinder output from all 47 species
Smo91749 ZIP1 Solute transport.carrier-mediated transport.ZIP... 0.02 OrthoFinder output from all 47 species
Solyc02g069190.4.1 ZIP10, Solyc02g069190 metal cation transporter (ZIP) 0.03 OrthoFinder output from all 47 species
Solyc02g069200.3.1 ATIRT1, IRT1,... metal cation transporter (ZIP) 0.03 OrthoFinder output from all 47 species
Solyc05g053370.3.1 ATZIP6, ZIP6,... metal cation transporter (ZIP) 0.03 OrthoFinder output from all 47 species
Solyc07g043200.2.1 ZIP3, Solyc07g043200 metal cation transporter (ZIP) 0.02 OrthoFinder output from all 47 species
Solyc07g043230.3.1 ZIP3, Solyc07g043230 metal cation transporter (ZIP) 0.11 OrthoFinder output from all 47 species
Zm00001e006463_P001 ZIP10, Zm00001e006463 metal cation transporter (ZIP) 0.02 OrthoFinder output from all 47 species
Zm00001e027487_P001 ATZIP6, ZIP6,... metal cation transporter (ZIP) 0.06 OrthoFinder output from all 47 species
Zm00001e031284_P002 ATZIP4, ZIP4,... metal cation transporter (ZIP) 0.03 OrthoFinder output from all 47 species
Zm00001e031884_P002 ZIP1, Zm00001e031884 metal cation transporter (ZIP) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
CC GO:0016020 membrane IEA Interproscan
BP GO:0030001 metal ion transport IEA Interproscan
MF GO:0046873 metal ion transmembrane transporter activity IEA Interproscan
BP GO:0055085 transmembrane transport IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEP HCCA
MF GO:0005216 monoatomic ion channel activity IEP HCCA
BP GO:0006355 regulation of DNA-templated transcription IEP HCCA
BP GO:0006753 nucleoside phosphate metabolic process IEP HCCA
BP GO:0006793 phosphorus metabolic process IEP HCCA
BP GO:0006796 phosphate-containing compound metabolic process IEP HCCA
BP GO:0009141 nucleoside triphosphate metabolic process IEP HCCA
BP GO:0009143 nucleoside triphosphate catabolic process IEP HCCA
BP GO:0009889 regulation of biosynthetic process IEP HCCA
BP GO:0010468 regulation of gene expression IEP HCCA
BP GO:0010556 regulation of macromolecule biosynthetic process IEP HCCA
MF GO:0015267 channel activity IEP HCCA
MF GO:0015276 ligand-gated monoatomic ion channel activity IEP HCCA
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP HCCA
BP GO:0019222 regulation of metabolic process IEP HCCA
BP GO:0019439 aromatic compound catabolic process IEP HCCA
MF GO:0022803 passive transmembrane transporter activity IEP HCCA
MF GO:0022834 ligand-gated channel activity IEP HCCA
MF GO:0022836 gated channel activity IEP HCCA
MF GO:0022839 monoatomic ion gated channel activity IEP HCCA
BP GO:0031323 regulation of cellular metabolic process IEP HCCA
BP GO:0031326 regulation of cellular biosynthetic process IEP HCCA
BP GO:0034655 nucleobase-containing compound catabolic process IEP HCCA
BP GO:0044270 cellular nitrogen compound catabolic process IEP HCCA
BP GO:0046434 organophosphate catabolic process IEP HCCA
BP GO:0046700 heterocycle catabolic process IEP HCCA
MF GO:0047429 nucleoside triphosphate diphosphatase activity IEP HCCA
BP GO:0051171 regulation of nitrogen compound metabolic process IEP HCCA
BP GO:0051252 regulation of RNA metabolic process IEP HCCA
BP GO:0060255 regulation of macromolecule metabolic process IEP HCCA
BP GO:0080090 regulation of primary metabolic process IEP HCCA
BP GO:1901292 nucleoside phosphate catabolic process IEP HCCA
BP GO:1901361 organic cyclic compound catabolic process IEP HCCA
BP GO:1903506 regulation of nucleic acid-templated transcription IEP HCCA
BP GO:2001141 regulation of RNA biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR003689 ZIP 48 387
No external refs found!