Aliases : AGO9, LOC_Os07g16224
Description : siRNA-integrating factor (AGO)
Gene families : OG0000157 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000157_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AT2G27880 | AGO5 | Argonaute family protein | 0.03 | OrthoFinder output from all 47 species | |
| AT2G32940 | AGO6 | Argonaute family protein | 0.03 | OrthoFinder output from all 47 species | |
| Adi_g088499 | AGO1 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aob_g11125 | AGO1 | regulatory protein *(AGO7) of transacting siRNA pathway... | 0.04 | OrthoFinder output from all 47 species | |
| Aspi01Gene35126.t1 | AGO1, Aspi01Gene35126 | miRNA recruiting factor (AGO) of RNA-induced silencing... | 0.03 | OrthoFinder output from all 47 species | |
| Azfi_s0045.g029842 | AGO1 | not classified & original description: CDS=36-3650 | 0.04 | OrthoFinder output from all 47 species | |
| Ceric.16G078000.1 | PNH, AGO10, ZLL,... | not classified & original description: pacid=50589285... | 0.02 | OrthoFinder output from all 47 species | |
| Ceric.30G040900.1 | AGO4, OCP11,... | siRNA-integrating factor *(AGO) & original description:... | 0.03 | OrthoFinder output from all 47 species | |
| Ceric.34G039800.1 | AGO1, Ceric.34G039800 | regulatory protein *(AGO7) of transacting siRNA pathway... | 0.06 | OrthoFinder output from all 47 species | |
| GSVIVT01029383001 | AGO1 | Chromatin organisation.DNA methylation.canonical... | 0.03 | OrthoFinder output from all 47 species | |
| Gb_34718 | PNH, AGO10, ZLL | Protein argonaute 10 OS=Arabidopsis thaliana... | 0.03 | OrthoFinder output from all 47 species | |
| LOC_Os02g40280.1 | AGO5, LOC_Os02g40280 | Protein argonaute 12 OS=Oryza sativa subsp. japonica... | 0.02 | OrthoFinder output from all 47 species | |
| LOC_Os02g58490.1 | AGO1, LOC_Os02g58490 | RIS-Complex miRNA recruiting factor (AGO1) | 0.03 | OrthoFinder output from all 47 species | |
| Len_g35246 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Lfl_g03429 | AGO1 | regulatory protein *(AGO7) of transacting siRNA pathway... | 0.02 | OrthoFinder output from all 47 species | |
| MA_118377g0010 | AGO1 | RIS-Complex miRNA recruiting factor (AGO1) | 0.04 | OrthoFinder output from all 47 species | |
| Mp1g18110.1 | AGO1 | RIS-Complex miRNA recruiting factor (AGO1) | 0.02 | OrthoFinder output from all 47 species | |
| Msp_g13472 | AGO1 | miRNA recruiting factor (AGO) of RNA-induced silencing... | 0.02 | OrthoFinder output from all 47 species | |
| Ore_g05462 | AGO1 | regulatory protein *(AGO7) of transacting siRNA pathway... | 0.02 | OrthoFinder output from all 47 species | |
| Ore_g06977 | AGO5 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ore_g10399 | AGO1 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Pnu_g20333 | AGO1 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0035.g011378 | AGO1 | siRNA-binding factor *(AGO2) of non-canonical RdDM... | 0.02 | OrthoFinder output from all 47 species | |
| Sam_g25176 | No alias | siRNA-integrating factor *(AGO) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Spa_g09278 | AGO1 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Spa_g51306 | AGO1 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Zm00001e017367_P001 | AGO4, OCP11,... | siRNA-integrating factor (AGO) | 0.03 | OrthoFinder output from all 47 species | |
| Zm00001e029696_P001 | AGO1, Zm00001e029696 | RIS-Complex miRNA recruiting factor (AGO1) | 0.03 | OrthoFinder output from all 47 species | |
| Zm00001e033643_P006 | AGO6, Zm00001e033643 | siRNA-integrating factor (AGO) | 0.02 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003676 | nucleic acid binding | IEA | Interproscan |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No Predicted GO terms available for this sequence |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR003165 | Piwi | 16 | 324 |
| No external refs found! |
