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  5. LOC_Os07g32730.1

LOC_Os07g32730.1 (LOC_Os07g32730)


Aliases : LOC_Os07g32730

Description : chromatin remodeling factor (Rad5-like)


Gene families : OG0002085 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002085_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os07g32730.1

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00037p00235150 evm_27.TU.AmTr_v1... Chromatin organisation.chromatin remodeling... 0.03 OrthoFinder output from all 47 species
AT1G05120 No alias Helicase protein with RING/U-box domain 0.04 OrthoFinder output from all 47 species
Aev_g06140 No alias chromatin remodeling factor *(Rad5-like) & original... 0.04 OrthoFinder output from all 47 species
Dde_g01732 No alias E3 ubiquitin ligase *(RNF170) & original description: none 0.04 OrthoFinder output from all 47 species
Mp7g11900.1 No alias chromatin remodeling factor (Rad5-like) 0.02 OrthoFinder output from all 47 species
Solyc05g044480.3.1 Solyc05g044480 chromatin remodeling factor (Rad5-like) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000723 telomere maintenance IEP HCCA
MF GO:0004721 phosphoprotein phosphatase activity IEP HCCA
BP GO:0006259 DNA metabolic process IEP HCCA
BP GO:0006996 organelle organization IEP HCCA
MF GO:0008138 protein tyrosine/serine/threonine phosphatase activity IEP HCCA
BP GO:0016043 cellular component organization IEP HCCA
BP GO:0016311 dephosphorylation IEP HCCA
MF GO:0016788 hydrolase activity, acting on ester bonds IEP HCCA
MF GO:0016791 phosphatase activity IEP HCCA
BP GO:0032200 telomere organization IEP HCCA
MF GO:0042578 phosphoric ester hydrolase activity IEP HCCA
BP GO:0044237 cellular metabolic process IEP HCCA
BP GO:0051276 chromosome organization IEP HCCA
BP GO:0071840 cellular component organization or biogenesis IEP HCCA
InterPro domains Description Start Stop
IPR001650 Helicase_C 200 312
No external refs found!