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  5. LOC_Os07g33270.1

LOC_Os07g33270.1 (LOC_Os07g33270)


Aliases : LOC_Os07g33270

Description : no hits & (original description: none)


Gene families : OG0000217 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000217_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os07g33270.1
Cluster HCCA: Cluster_112

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00068p00151940 evm_27.TU.AmTr_v1... No description available 0.01 OrthoFinder output from all 47 species
AMTR_s00148p00028850 evm_27.TU.AmTr_v1... No description available 0.05 OrthoFinder output from all 47 species
AT1G11700 No alias Protein of unknown function, DUF584 0.06 OrthoFinder output from all 47 species
AT1G29640 No alias Protein of unknown function, DUF584 0.03 OrthoFinder output from all 47 species
AT2G28400 No alias Protein of unknown function, DUF584 0.05 OrthoFinder output from all 47 species
AT2G34340 No alias Protein of unknown function, DUF584 0.03 OrthoFinder output from all 47 species
AT3G45210 No alias Protein of unknown function, DUF584 0.02 OrthoFinder output from all 47 species
AT4G18980 AtS40-3 AtS40-3 0.04 OrthoFinder output from all 47 species
AT4G26950 No alias Protein of unknown function, DUF584 0.03 OrthoFinder output from all 47 species
AT5G45630 No alias Protein of unknown function, DUF584 0.03 OrthoFinder output from all 47 species
AT5G60680 No alias Protein of unknown function, DUF584 0.04 OrthoFinder output from all 47 species
Adi_g059495 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g077580 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g02883 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g04612 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g01505 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g11220 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Als_g24167 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g01046 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g03049 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene45725.t1 Aspi01Gene45725 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Azfi_s0007.g010657 No alias not classified & original description: CDS=1-753 0.02 OrthoFinder output from all 47 species
Azfi_s0705.g082674 No alias not classified & original description: CDS=1-897 0.02 OrthoFinder output from all 47 species
Cba_g45778 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Ceric.01G065200.1 Ceric.01G065200 not classified & original description: pacid=50591727... 0.02 OrthoFinder output from all 47 species
Ceric.02G107800.1 Ceric.02G107800 not classified & original description: pacid=50585116... 0.03 OrthoFinder output from all 47 species
Ceric.21G020100.1 Ceric.21G020100 not classified & original description: pacid=50603989... 0.03 OrthoFinder output from all 47 species
Ceric.29G056400.1 Ceric.29G056400 not classified & original description: pacid=50624938... 0.02 OrthoFinder output from all 47 species
Dac_g10328 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dac_g22321 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dac_g22624 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dac_g31714 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dac_g32686 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g00623 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Dde_g06199 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g00595 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g02162 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g04410 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
GSVIVT01004631001 No alias No description available 0.03 OrthoFinder output from all 47 species
GSVIVT01025190001 No alias No description available 0.04 OrthoFinder output from all 47 species
GSVIVT01033884001 No alias No description available 0.02 OrthoFinder output from all 47 species
LOC_Os04g43990.1 LOC_Os04g43990 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
LOC_Os04g45834.1 LOC_Os04g45834 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
LOC_Os10g27350.1 LOC_Os10g27350 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Len_g16906 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Len_g24337 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Len_g41501 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
MA_118009g0010 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
MA_2588g0010 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Msp_g22078 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Msp_g42452 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g35863 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pnu_g02384 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pnu_g05667 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0008.g003978 No alias not classified & original description: CDS=1-753 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0012.g005504 No alias not classified & original description: CDS=1-846 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0207.g025787 No alias not classified & original description: CDS=159-1094 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0450.g027397 No alias not classified & original description: CDS=1-765 0.02 OrthoFinder output from all 47 species
Smo95729 No alias No description available 0.02 OrthoFinder output from all 47 species
Solyc02g032800.1.1 Solyc02g032800 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Solyc02g080510.1.1 Solyc02g080510 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Solyc07g064650.3.1 Solyc07g064650 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Solyc09g007790.1.1 Solyc09g007790 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Zm00001e007566_P001 Zm00001e007566 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Zm00001e012668_P001 Zm00001e012668 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Zm00001e015167_P001 Zm00001e015167 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Zm00001e019921_P001 Zm00001e019921 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Zm00001e035102_P001 Zm00001e035102 no hits & (original description: none) 0.06 OrthoFinder output from all 47 species
Zm00001e039074_P001 Zm00001e039074 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Zm00001e041249_P001 Zm00001e041249 no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
Zm00001e041345_P001 Zm00001e041345 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000375 RNA splicing, via transesterification reactions IEP HCCA
BP GO:0000377 RNA splicing, via transesterification reactions with bulged adenosine as nucleophile IEP HCCA
BP GO:0000398 mRNA splicing, via spliceosome IEP HCCA
BP GO:0006397 mRNA processing IEP HCCA
MF GO:0008080 N-acetyltransferase activity IEP HCCA
MF GO:0008146 sulfotransferase activity IEP HCCA
BP GO:0008380 RNA splicing IEP HCCA
MF GO:0009916 alternative oxidase activity IEP HCCA
BP GO:0016071 mRNA metabolic process IEP HCCA
MF GO:0016407 acetyltransferase activity IEP HCCA
MF GO:0016410 N-acyltransferase activity IEP HCCA
MF GO:0016679 oxidoreductase activity, acting on diphenols and related substances as donors IEP HCCA
MF GO:0016682 oxidoreductase activity, acting on diphenols and related substances as donors, oxygen as acceptor IEP HCCA
MF GO:0016782 transferase activity, transferring sulphur-containing groups IEP HCCA
InterPro domains Description Start Stop
IPR007608 Senescence_reg_S40 105 195
No external refs found!