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  5. LOC_Os07g35880.1

LOC_Os07g35880.1 (RAM1, BMY1,...)


Aliases : RAM1, BMY1, AT-BETA-AMY, BAM5, ATBETA-AMY, LOC_Os07g35880

Description : beta amylase


Gene families : OG0000477 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000477_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os07g35880.1

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00002p00150440 BMY8, BAM3,... Carbohydrate metabolism.starch... 0.04 OrthoFinder output from all 47 species
AMTR_s00057p00154460 BAM9, BMY3,... Carbohydrate metabolism.starch... 0.03 OrthoFinder output from all 47 species
AT4G15210 RAM1, BMY1,... beta-amylase 5 0.04 OrthoFinder output from all 47 species
Als_g05689 BAM1, BMY7, TR-BAMY EC_3.2 glycosylase & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g35885 BAM1, BMY7, TR-BAMY EC_3.2 glycosylase & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene25032.t1 BAM1, BMY7,... EC_3.2 glycosylase & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene44603.t1 BMY5, BAM6,... EC_3.2 glycosylase & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene69400.t1 BMY8, BAM3,... EC_3.2 glycosylase & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g09882 BAM4, BMY6 EC_3.2 glycosylase & original description: none 0.03 OrthoFinder output from all 47 species
Gb_28692 BAM1, BMY7, TR-BAMY beta amylase 0.03 OrthoFinder output from all 47 species
Len_g08375 BMY8, BAM3, CT-BMY EC_3.2 glycosylase & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g22613 BAM1, BMY7, TR-BAMY EC_3.2 glycosylase & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g30972 BAM1, BMY7, TR-BAMY EC_3.2 glycosylase & original description: none 0.03 OrthoFinder output from all 47 species
MA_10432035g0010 BAM1, BMY7, TR-BAMY beta amylase 0.04 OrthoFinder output from all 47 species
Ore_g03251 BAM1, BMY7, TR-BAMY EC_3.2 glycosylase & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g07345 No alias EC_3.2 glycosylase & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g14984 BMY8, BAM3, CT-BMY EC_3.2 glycosylase & original description: none 0.02 OrthoFinder output from all 47 species
Zm00001e000343_P005 BAM1, BMY7,... beta amylase 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
BP GO:0000272 polysaccharide catabolic process IEA Interproscan
MF GO:0016161 beta-amylase activity IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0003333 amino acid transmembrane transport IEP HCCA
BP GO:0006865 amino acid transport IEP HCCA
MF GO:0008194 UDP-glycosyltransferase activity IEP HCCA
BP GO:0015849 organic acid transport IEP HCCA
BP GO:0071702 organic substance transport IEP HCCA
BP GO:0071705 nitrogen compound transport IEP HCCA
BP GO:1903825 organic acid transmembrane transport IEP HCCA
BP GO:1905039 carboxylic acid transmembrane transport IEP HCCA
InterPro domains Description Start Stop
IPR001554 Glyco_hydro_14 95 519
No external refs found!