Aliases : LOC_Os07g39560
Description : Heterogeneous nuclear ribonucleoprotein 1 OS=Arabidopsis thaliana (sp|q8w034|rnp1_arath : 205.0)
Gene families : OG0000120 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000120_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AT3G07810 | No alias | RNA-binding (RRM/RBD/RNP motifs) family protein | 0.05 | OrthoFinder output from all 47 species | |
| AT5G55550 | No alias | RNA-binding (RRM/RBD/RNP motifs) family protein | 0.04 | OrthoFinder output from all 47 species | |
| Adi_g059149 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Adi_g107999 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aev_g05983 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ala_g02388 | No alias | not classified & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Ala_g08655 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Als_g07316 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Als_g16494 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Als_g19244 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Als_g49724 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aob_g26376 | No alias | not classified & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Aop_g03820 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aop_g32654 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Aspi01Gene47653.t1 | Aspi01Gene47653 | not classified & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Ceric.11G086800.1 | Ceric.11G086800 | not classified & original description: pacid=50595981... | 0.03 | OrthoFinder output from all 47 species | |
| Ceric.23G034800.1 | Ceric.23G034800 | not classified & original description: pacid=50611547... | 0.05 | OrthoFinder output from all 47 species | |
| Ceric.28G061700.1 | Ceric.28G061700 | not classified & original description: pacid=50569499... | 0.05 | OrthoFinder output from all 47 species | |
| Dac_g01661 | No alias | not classified & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Dcu_g02961 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Dcu_g06314 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Ehy_g06861 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ehy_g15720 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| GSVIVT01016872001 | No alias | Heterogeneous nuclear ribonucleoprotein 1 OS=Arabidopsis thaliana | 0.03 | OrthoFinder output from all 47 species | |
| Gb_16979 | No alias | Heterogeneous nuclear ribonucleoprotein 1 OS=Arabidopsis... | 0.03 | OrthoFinder output from all 47 species | |
| LOC_Os07g03240.1 | LOC_Os07g03240 | RNA-binding protein 1 OS=Arabidopsis thaliana... | 0.04 | OrthoFinder output from all 47 species | |
| Len_g37329 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Lfl_g06582 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| MA_13606g0010 | No alias | Heterogeneous nuclear ribonucleoprotein 1 OS=Arabidopsis... | 0.03 | OrthoFinder output from all 47 species | |
| MpVg00970.1 | No alias | No annotation | 0.03 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0004.g002214 | No alias | not classified & original description: CDS=892-2337 | 0.02 | OrthoFinder output from all 47 species | |
| Sam_g10981 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Spa_g08933 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Zm00001e011415_P001 | Zm00001e011415 | Heterogeneous nuclear ribonucleoprotein 1 OS=Arabidopsis... | 0.04 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003676 | nucleic acid binding | IEA | Interproscan |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds | IEP | HCCA |
| MF | GO:0004650 | polygalacturonase activity | IEP | HCCA |
| MF | GO:0005509 | calcium ion binding | IEP | HCCA |
| MF | GO:0016787 | hydrolase activity | IEP | HCCA |
| MF | GO:0016798 | hydrolase activity, acting on glycosyl bonds | IEP | HCCA |
| MF | GO:0033926 | glycopeptide alpha-N-acetylgalactosaminidase activity | IEP | HCCA |
| MF | GO:0140096 | catalytic activity, acting on a protein | IEP | HCCA |
| MF | GO:0140103 | catalytic activity, acting on a glycoprotein | IEP | HCCA |
| No external refs found! |
