LOC_Os07g40940.1 (PDCB2, E13L3, LOC_Os07g40940)


Aliases : PDCB2, E13L3, LOC_Os07g40940

Description : PLASMODESMATA CALLOSE-BINDING PROTEIN 3 OS=Arabidopsis thaliana (sp|q9fz86|pdcb3_arath : 108.0)


Gene families : OG0000198 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000198_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os07g40940.1

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00002p00090370 evm_27.TU.AmTr_v1... PLASMODESMATA CALLOSE-BINDING PROTEIN 2 OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
AMTR_s00013p00250830 evm_27.TU.AmTr_v1... PLASMODESMATA CALLOSE-BINDING PROTEIN 3 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
AMTR_s00021p00163410 PDCB5,... PLASMODESMATA CALLOSE-BINDING PROTEIN 5 OS=Arabidopsis thaliana 0.05 OrthoFinder output from all 47 species
AMTR_s00044p00136030 evm_27.TU.AmTr_v1... Enzyme classification.EC_3 hydrolases.EC_3.2 glycosylase 0.03 OrthoFinder output from all 47 species
AMTR_s00086p00121550 evm_27.TU.AmTr_v1... Glucan endo-1,3-beta-glucosidase 12 OS=Arabidopsis thaliana 0.06 OrthoFinder output from all 47 species
AMTR_s00110p00143620 PDCB2, E13L3,... PLASMODESMATA CALLOSE-BINDING PROTEIN 3 OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
AT1G13830 No alias Carbohydrate-binding X8 domain superfamily protein 0.03 OrthoFinder output from all 47 species
AT1G18650 PDCB3 plasmodesmata callose-binding protein 3 0.07 OrthoFinder output from all 47 species
AT1G66870 No alias Carbohydrate-binding X8 domain superfamily protein 0.03 OrthoFinder output from all 47 species
AT1G78520 No alias Carbohydrate-binding X8 domain superfamily protein 0.05 OrthoFinder output from all 47 species
AT4G09462 No alias Carbohydrate-binding X8 domain superfamily protein 0.03 OrthoFinder output from all 47 species
AT4G13600 No alias Carbohydrate-binding X8 domain superfamily protein 0.02 OrthoFinder output from all 47 species
AT5G08000 PDCB2, E13L3 glucan endo-1,3-beta-glucosidase-like protein 3 0.07 OrthoFinder output from all 47 species
AT5G35740 No alias Carbohydrate-binding X8 domain superfamily protein 0.04 OrthoFinder output from all 47 species
AT5G61130 PDCB1 plasmodesmata callose-binding protein 1 0.06 OrthoFinder output from all 47 species
AT5G63240 No alias Carbohydrate-binding X8 domain superfamily protein 0.05 OrthoFinder output from all 47 species
Aev_g18704 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g38371 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g14411 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g18859 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g25236 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g27838 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g28990 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Ala_g33123 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g08617 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Als_g12127 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g31221 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g00233 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g03667 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aop_g08402 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g09349 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g09515 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g38386 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aspi01Gene08830.t1 Aspi01Gene08830 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene17170.t1 Aspi01Gene17170 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene48986.t1 Aspi01Gene48986 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0114.g046176 No alias not classified & original description: CDS=153-617 0.04 OrthoFinder output from all 47 species
Azfi_s0259.g060656 No alias not classified & original description: CDS=357-1106 0.06 OrthoFinder output from all 47 species
Cba_g00460 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Cba_g05481 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g09231 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g09344 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g15626 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ceric.03G019400.1 Ceric.03G019400 not classified & original description: pacid=50572611... 0.04 OrthoFinder output from all 47 species
Ceric.16G030300.1 Ceric.16G030300 not classified & original description: pacid=50589646... 0.05 OrthoFinder output from all 47 species
Ceric.27G011500.1 Ceric.27G011500 not classified & original description: pacid=50604942... 0.03 OrthoFinder output from all 47 species
Ceric.27G013100.1 Ceric.27G013100 not classified & original description: pacid=50605460... 0.05 OrthoFinder output from all 47 species
Dac_g03506 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dac_g07234 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g08788 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Dac_g11445 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dac_g14637 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dac_g16407 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g21552 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Dac_g21791 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g37072 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g37849 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Dac_g37975 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g00456 PDCB2, E13L3 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dcu_g04537 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g11842 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g12197 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dcu_g37443 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g28049 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Ehy_g08964 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ehy_g10392 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
GSVIVT01007873001 PDCB3 PLASMODESMATA CALLOSE-BINDING PROTEIN 3 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
GSVIVT01014068001 No alias Glucan endo-1,3-beta-D-glucosidase OS=Olea europaea 0.05 OrthoFinder output from all 47 species
GSVIVT01020664001 PDCB5 PLASMODESMATA CALLOSE-BINDING PROTEIN 5 OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
GSVIVT01021412001 No alias Glucan endo-1,3-beta-glucosidase OS=Triticum aestivum 0.04 OrthoFinder output from all 47 species
GSVIVT01030060001 No alias Glucan endo-1,3-beta-glucosidase 4 OS=Arabidopsis thaliana 0.07 OrthoFinder output from all 47 species
GSVIVT01036726001 No alias PLASMODESMATA CALLOSE-BINDING PROTEIN 2 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
Gb_10965 No alias Glucan endo-1,3-beta-glucosidase 4 OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species
Gb_14999 No alias Glucan endo-1,3-beta-glucosidase 12 OS=Arabidopsis... 0.05 OrthoFinder output from all 47 species
Gb_15010 No alias Glucan endo-1,3-beta-glucosidase 1 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
Gb_41331 No alias Glucan endo-1,3-beta-glucosidase 12 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
LOC_Os03g54910.1 PDCB2, E13L3,... PLASMODESMATA CALLOSE-BINDING PROTEIN 3 OS=Arabidopsis... 0.04 OrthoFinder output from all 47 species
LOC_Os06g34660.1 PDCB5, LOC_Os06g34660 PLASMODESMATA CALLOSE-BINDING PROTEIN 5 OS=Arabidopsis... 0.04 OrthoFinder output from all 47 species
Len_g04122 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g10442 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g14015 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Len_g35363 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Len_g35967 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g53541 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Len_g56789 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Lfl_g00203 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g02859 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g18119 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
MA_210389g0010 No alias PLASMODESMATA CALLOSE-BINDING PROTEIN 5 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
MA_939354g0010 No alias Glucan endo-1,3-beta-glucosidase 1 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
Msp_g00789 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g01765 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g17781 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Msp_g18020 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Msp_g24416 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g27019 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Msp_g29067 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g30042 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g36714 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Nbi_g04114 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g10702 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g37804 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Nbi_g39197 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Nbi_g39199 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Nbi_g41952 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Ore_g05622 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g23290 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g24240 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g46923 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g57652 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pnu_g18874 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pnu_g28709 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g02776 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g16036 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g16149 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g33619 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g36355 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Ppi_g62036 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g63831 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Sacu_v1.1_s0038.g012023 No alias not classified & original description: CDS=866-1510 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0059.g015092 No alias not classified & original description: CDS=288-854 0.05 OrthoFinder output from all 47 species
Sacu_v1.1_s0122.g021452 No alias not classified & original description: CDS=113-766 0.06 OrthoFinder output from all 47 species
Sacu_v1.1_s0173.g024478 No alias not classified & original description: CDS=949-2307 0.03 OrthoFinder output from all 47 species
Sam_g06584 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g24668 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g31368 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g35966 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Solyc01g010310.4.1 Solyc01g010310 PLASMODESMATA CALLOSE-BINDING PROTEIN 3 OS=Arabidopsis... 0.05 OrthoFinder output from all 47 species
Solyc02g071200.4.1 Solyc02g071200 Glucan endo-1,3-beta-glucosidase 1 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
Solyc03g115200.3.1 PDCB1, Solyc03g115200 PLASMODESMATA CALLOSE-BINDING PROTEIN 3 OS=Arabidopsis... 0.04 OrthoFinder output from all 47 species
Solyc04g058080.3.1 Solyc04g058080 Glucan endo-1,3-beta-glucosidase 13 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
Solyc05g016390.4.1 Solyc05g016390 Glucan endo-1,3-beta-glucosidase 1 OS=Arabidopsis... 0.04 OrthoFinder output from all 47 species
Solyc07g062010.1.1 Solyc07g062010 Glucan endo-1,3-beta-glucosidase OS=Triticum aestivum... 0.03 OrthoFinder output from all 47 species
Solyc07g062020.2.1 Solyc07g062020 Glucan endo-1,3-beta-glucosidase OS=Triticum aestivum... 0.03 OrthoFinder output from all 47 species
Solyc11g012580.2.1 Solyc11g012580 Glucan endo-1,3-beta-glucosidase 4 OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species
Spa_g03240 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g06484 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Spa_g24337 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g28067 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g29731 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g46844 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g50712 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g14190 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g14416 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g20543 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g37664 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Zm00001e002008_P001 PDCB2, E13L3,... Glucan endo-1,3-beta-glucosidase 3 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
Zm00001e005720_P001 PDCB2, E13L3,... PLASMODESMATA CALLOSE-BINDING PROTEIN 3 OS=Arabidopsis... 0.04 OrthoFinder output from all 47 species
Zm00001e007819_P002 Zm00001e007819 Glucan endo-1,3-beta-D-glucosidase OS=Olea europaea... 0.02 OrthoFinder output from all 47 species
Zm00001e010706_P001 PDCB2, E13L3,... PLASMODESMATA CALLOSE-BINDING PROTEIN 3 OS=Arabidopsis... 0.04 OrthoFinder output from all 47 species
Zm00001e016347_P001 Zm00001e016347 Glucan endo-1,3-beta-D-glucosidase OS=Olea europaea... 0.03 OrthoFinder output from all 47 species
Zm00001e032121_P001 PDCB1, Zm00001e032121 Glucan endo-1,3-beta-glucosidase 3 OS=Arabidopsis... 0.05 OrthoFinder output from all 47 species
Zm00001e035487_P001 PDCB2, E13L3,... PLASMODESMATA CALLOSE-BINDING PROTEIN 3 OS=Arabidopsis... 0.13 OrthoFinder output from all 47 species
Zm00001e038052_P001 PDCB2, E13L3,... Glucan endo-1,3-beta-glucosidase 3 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0003924 GTPase activity IEP HCCA
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEP HCCA
MF GO:0004650 polygalacturonase activity IEP HCCA
MF GO:0004672 protein kinase activity IEP HCCA
MF GO:0005515 protein binding IEP HCCA
CC GO:0005576 extracellular region IEP HCCA
CC GO:0005618 cell wall IEP HCCA
BP GO:0005975 carbohydrate metabolic process IEP HCCA
BP GO:0005976 polysaccharide metabolic process IEP HCCA
BP GO:0006073 cellular glucan metabolic process IEP HCCA
BP GO:0006468 protein phosphorylation IEP HCCA
BP GO:0006631 fatty acid metabolic process IEP HCCA
BP GO:0006633 fatty acid biosynthetic process IEP HCCA
BP GO:0008152 metabolic process IEP HCCA
MF GO:0016462 pyrophosphatase activity IEP HCCA
MF GO:0016740 transferase activity IEP HCCA
MF GO:0016762 xyloglucan:xyloglucosyl transferase activity IEP HCCA
MF GO:0016787 hydrolase activity IEP HCCA
MF GO:0016798 hydrolase activity, acting on glycosyl bonds IEP HCCA
MF GO:0016817 hydrolase activity, acting on acid anhydrides IEP HCCA
MF GO:0016818 hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides IEP HCCA
MF GO:0017111 ribonucleoside triphosphate phosphatase activity IEP HCCA
CC GO:0030312 external encapsulating structure IEP HCCA
BP GO:0044042 glucan metabolic process IEP HCCA
BP GO:0044237 cellular metabolic process IEP HCCA
BP GO:0044238 primary metabolic process IEP HCCA
BP GO:0044264 cellular polysaccharide metabolic process IEP HCCA
MF GO:0046527 glucosyltransferase activity IEP HCCA
CC GO:0048046 apoplast IEP HCCA
BP GO:0071704 organic substance metabolic process IEP HCCA
BP GO:0072330 monocarboxylic acid biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR012946 X8 22 92
No external refs found!