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  5. LOC_Os07g48340.1

LOC_Os07g48340.1 (CML42, LOC_Os07g48340)


Aliases : CML42, LOC_Os07g48340

Description : Probable calcium-binding protein CML24 OS=Oryza sativa subsp. japonica (sp|q7xhw4|cml24_orysj : 317.0)


Gene families : OG0000205 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000205_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os07g48340.1

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00121p00130840 evm_27.TU.AmTr_v1... No description available 0.04 OrthoFinder output from all 47 species
AMTR_s00316p00011560 UNE14,... Probable calcium-binding protein CML43 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
AMTR_s00316p00012460 evm_27.TU.AmTr_v1... Calcium-binding protein CML42 OS=Arabidopsis thaliana 0.07 OrthoFinder output from all 47 species
Aev_g00406 UNE14 calcium sensor *(CML) & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g09654 CML42 calcium sensor *(CML) & original description: none 0.04 OrthoFinder output from all 47 species
Aev_g11342 AGD11 calcium sensor *(CML) & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g20304 AGD11 calcium sensor *(CML) & original description: none 0.03 OrthoFinder output from all 47 species
Als_g20140 UNE14 calcium sensor *(CML) & original description: none 0.03 OrthoFinder output from all 47 species
Als_g43266 UNE14 calcium sensor *(CML) & original description: none 0.01 OrthoFinder output from all 47 species
Als_g57706 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aob_g02922 UNE14 calcium sensor *(CML) & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g13274 CML42 calcium sensor *(CML) & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g31301 UNE14 calcium sensor *(CML) & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g36467 UNE14 calcium sensor *(CML) & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g10774 CML42 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene34652.t1 CML42, Aspi01Gene34652 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene34906.t1 UNE14, Aspi01Gene34906 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Azfi_s0367.g066979 UNE14 calcium sensor *(CML) & original description: CDS=1-1074 0.02 OrthoFinder output from all 47 species
Cba_g04289 UNE14 calcium sensor *(CML) & original description: none 0.01 OrthoFinder output from all 47 species
Ceric.16G002500.1 Ceric.16G002500 calcium sensor *(CML) & original description:... 0.02 OrthoFinder output from all 47 species
Ceric.25G037500.1 CML42, Ceric.25G037500 calcium sensor *(CML) & original description:... 0.02 OrthoFinder output from all 47 species
Dcu_g02262 CML42 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g11700 UNE14 calcium sensor *(CML) & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g18813 UNE14 calcium sensor *(CML) & original description: none 0.04 OrthoFinder output from all 47 species
Dde_g06167 CML42 calcium sensor *(CML) & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g51157 UNE14 not classified & original description: none 0.01 OrthoFinder output from all 47 species
Ehy_g16822 UNE14 calcium sensor *(CML) & original description: none 0.01 OrthoFinder output from all 47 species
Ehy_g25457 UNE14 calcium sensor *(CML) & original description: none 0.04 OrthoFinder output from all 47 species
GSVIVT01015585001 UNE14 Calmodulin-like protein 2 OS=Arabidopsis thaliana 0.05 OrthoFinder output from all 47 species
Gb_15095 MSS3 Calmodulin-like protein 5 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Gb_28443 UNE14 Calmodulin-like protein 2 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
LOC_Os05g24780.1 CML42, LOC_Os05g24780 Probable calcium-binding protein CML21 OS=Oryza sativa... 0.02 OrthoFinder output from all 47 species
LOC_Os06g07560.1 UNE14, LOC_Os06g07560 Probable calcium-binding protein CML30 OS=Oryza sativa... 0.03 OrthoFinder output from all 47 species
Len_g17959 UNE14 calcium sensor *(CML) & original description: none 0.01 OrthoFinder output from all 47 species
Len_g23777 CML42 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g29582 TCH3, ATCAL4 not classified & original description: none 0.03 OrthoFinder output from all 47 species
MA_27386g0010 UNE14 Probable calcium-binding protein CML27 OS=Oryza sativa... 0.02 OrthoFinder output from all 47 species
MA_472945g0010 AGD11 Calmodulin-like protein 5 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Mp5g22000.1 UNE14 Calmodulin-like protein 5 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Pir_g10055 CML42 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g40429 UNE14 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g03113 UNE14 calcium sensor *(CML) & original description: none 0.02 OrthoFinder output from all 47 species
Pnu_g18052 AGD11 calcium sensor *(CML) & original description: none 0.02 OrthoFinder output from all 47 species
Pnu_g21574 CML42 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pnu_g27455 UNE14 calcium sensor *(CML) & original description: none 0.01 OrthoFinder output from all 47 species
Smo96597 AGD11 Calmodulin-like protein 3 OS=Arabidopsis thaliana 0.05 OrthoFinder output from all 47 species
Solyc10g074740.2.1 CML42, Solyc10g074740 Calcium-binding protein CAST OS=Solanum tuberosum... 0.02 OrthoFinder output from all 47 species
Spa_g11411 AGD11 calcium sensor *(CML) & original description: none 0.02 OrthoFinder output from all 47 species
Zm00001e001557_P001 CML42, Zm00001e001557 Probable calcium-binding protein CML27 OS=Oryza sativa... 0.02 OrthoFinder output from all 47 species
Zm00001e035870_P001 CML42, Zm00001e035870 Probable calcium-binding protein CML32 OS=Oryza sativa... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005509 calcium ion binding IEA Interproscan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR002048 EF_hand_dom 39 68
IPR002048 EF_hand_dom 125 190
No external refs found!