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  5. LOC_Os07g48500.1

LOC_Os07g48500.1 (LOC_Os07g48500)


Aliases : LOC_Os07g48500

Description : Ricin B-like lectin R40G3 OS=Oryza sativa subsp. japonica (sp|q6z4n4|40g3_orysj : 368.0)


Gene families : OG0000410 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000410_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os07g48500.1
Cluster HCCA: Cluster_69

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00148p00065520 evm_27.TU.AmTr_v1... Ricin B-like lectin R40G3 OS=Oryza sativa subsp. japonica 0.06 OrthoFinder output from all 47 species
Ceric.30G019500.1 Ceric.30G019500 not classified & original description: pacid=50608620... 0.03 OrthoFinder output from all 47 species
Gb_13268 No alias Ricin B-like lectin R40G3 OS=Oryza sativa subsp.... 0.03 OrthoFinder output from all 47 species
Lfl_g25580 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
MA_10435501g0020 No alias Ricin B-like lectin EULS3 OS=Arabidopsis thaliana... 0.04 OrthoFinder output from all 47 species
MA_10435501g0030 No alias Ricin B-like lectin R40G3 OS=Oryza sativa subsp.... 0.03 OrthoFinder output from all 47 species
Ore_g39302 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g02124 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g08350 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g15270 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
CC GO:0005575 cellular_component IEP HCCA
CC GO:0016020 membrane IEP HCCA
MF GO:0016462 pyrophosphatase activity IEP HCCA
MF GO:0016817 hydrolase activity, acting on acid anhydrides IEP HCCA
MF GO:0016818 hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides IEP HCCA
MF GO:0016887 ATP hydrolysis activity IEP HCCA
MF GO:0017111 ribonucleoside triphosphate phosphatase activity IEP HCCA
CC GO:0110165 cellular anatomical entity IEP HCCA

No InterPro domains available for this sequence

No external refs found!