LOC_Os07g48596.1 (LOC_Os07g48596)


Aliases : LOC_Os07g48596

Description : G2-like GARP transcription factor


Gene families : OG0000036 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os07g48596.1

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00021p00013790 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.MYB... 0.03 OrthoFinder output from all 47 species
AMTR_s00022p00190540 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.MYB... 0.02 OrthoFinder output from all 47 species
AMTR_s00025p00151950 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.MYB... 0.02 OrthoFinder output from all 47 species
AMTR_s00119p00095480 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.MYB... 0.02 OrthoFinder output from all 47 species
AMTR_s00131p00063460 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.MYB... 0.05 OrthoFinder output from all 47 species
AT1G79430 APL, WDY Homeodomain-like superfamily protein 0.03 OrthoFinder output from all 47 species
AT3G12730 No alias Homeodomain-like superfamily protein 0.05 OrthoFinder output from all 47 species
AT5G06800 No alias myb-like HTH transcriptional regulator family protein 0.03 OrthoFinder output from all 47 species
Adi_g023512 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g024494 ATMYR1, MYR1 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g078895 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Adi_g080178 No alias GARP subgroup PHL transcription factor & original... 0.02 OrthoFinder output from all 47 species
Adi_g106095 No alias GARP subgroup PHL transcription factor & original... 0.02 OrthoFinder output from all 47 species
Aev_g09014 No alias not classified & original description: none 0.08 OrthoFinder output from all 47 species
Ala_g11209 No alias GARP subgroup PHL transcription factor & original... 0.02 OrthoFinder output from all 47 species
Ala_g22160 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Ala_g22715 No alias GARP subgroup PHL transcription factor & original... 0.03 OrthoFinder output from all 47 species
Als_g01879 No alias GARP subgroup PHL transcription factor & original... 0.02 OrthoFinder output from all 47 species
Aob_g04221 No alias GARP subgroup PHL transcription factor & original... 0.03 OrthoFinder output from all 47 species
Cba_g17095 PHR1, AtPHR1 GARP subgroup PHL transcription factor & original... 0.01 OrthoFinder output from all 47 species
Cba_g37355 No alias GARP subgroup PHL transcription factor & original... 0.02 OrthoFinder output from all 47 species
Ceric.31G067100.1 Ceric.31G067100 GARP subgroup PHL transcription factor & original... 0.02 OrthoFinder output from all 47 species
Dac_g20781 No alias GARP subgroup PHL transcription factor & original... 0.02 OrthoFinder output from all 47 species
Dcu_g11678 No alias GARP subgroup PHL transcription factor & original... 0.02 OrthoFinder output from all 47 species
Dcu_g17283 No alias GARP subgroup PHL transcription factor & original... 0.03 OrthoFinder output from all 47 species
Dcu_g40682 No alias GARP subgroup PHL transcription factor & original... 0.02 OrthoFinder output from all 47 species
Ehy_g03380 No alias GARP subgroup PHL transcription factor & original... 0.02 OrthoFinder output from all 47 species
Ehy_g06739 No alias GARP subgroup PHL transcription factor & original... 0.02 OrthoFinder output from all 47 species
Ehy_g22986 KAN4, ATS KANADI-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01022645001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.03 OrthoFinder output from all 47 species
GSVIVT01033381001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.03 OrthoFinder output from all 47 species
GSVIVT01036717001 APL, WDY RNA biosynthesis.transcriptional activation.MYB... 0.03 OrthoFinder output from all 47 species
Gb_13931 No alias G2-like GARP transcription factor 0.03 OrthoFinder output from all 47 species
Len_g13527 No alias GARP subgroup PHL transcription factor & original... 0.02 OrthoFinder output from all 47 species
Len_g15642 No alias GARP subgroup PHL transcription factor & original... 0.02 OrthoFinder output from all 47 species
Len_g22909 No alias GARP subgroup PHL transcription factor & original... 0.02 OrthoFinder output from all 47 species
Lfl_g01611 No alias GARP subgroup PHL transcription factor & original... 0.02 OrthoFinder output from all 47 species
MA_181986g0010 ATMYR1, MYR1 G2-like GARP transcription factor 0.02 OrthoFinder output from all 47 species
Msp_g12599 No alias transcription factor *(CLAUSA) & original description: none 0.02 OrthoFinder output from all 47 species
Msp_g21035 KAN4, ATS KANADI-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g03481 KAN3 KANADI-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g17637 No alias transcription factor *(CLAUSA) & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g17650 No alias transcription factor *(CLAUSA) & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g43901 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g26301 No alias GARP subgroup PHL transcription factor & original... 0.06 OrthoFinder output from all 47 species
Pnu_g06354 No alias GARP subgroup PHL transcription factor & original... 0.03 OrthoFinder output from all 47 species
Pnu_g17498 No alias GARP subgroup PHL transcription factor & original... 0.02 OrthoFinder output from all 47 species
Pnu_g24931 No alias GARP subgroup PHL transcription factor & original... 0.02 OrthoFinder output from all 47 species
Pnu_g25413 No alias GARP subgroup PHL transcription factor & original... 0.02 OrthoFinder output from all 47 species
Ppi_g05575 No alias GARP subgroup PHL transcription factor & original... 0.01 OrthoFinder output from all 47 species
Ppi_g30309 No alias GARP subgroup PHL transcription factor & original... 0.05 OrthoFinder output from all 47 species
Sam_g06417 No alias GARP subgroup PHL transcription factor & original... 0.02 OrthoFinder output from all 47 species
Sam_g40619 No alias GARP subgroup PHL transcription factor & original... 0.02 OrthoFinder output from all 47 species
Solyc02g076670.3.1 Solyc02g076670 Putative Myb family transcription factor At1g14600... 0.02 OrthoFinder output from all 47 species
Solyc06g051060.4.1 Solyc06g051060 G2-like GARP transcription factor 0.05 OrthoFinder output from all 47 species
Solyc10g083340.3.1 Solyc10g083340 G2-like GARP transcription factor 0.02 OrthoFinder output from all 47 species
Solyc12g017370.3.1 APL, WDY, Solyc12g017370 G2-like GARP transcription factor 0.03 OrthoFinder output from all 47 species
Spa_g09479 No alias GARP subgroup PHL transcription factor & original... 0.03 OrthoFinder output from all 47 species
Zm00001e001526_P001 Zm00001e001526 G2-like GARP transcription factor 0.02 OrthoFinder output from all 47 species
Zm00001e011962_P002 KAN2, Zm00001e011962 G2-like GARP transcription factor 0.02 OrthoFinder output from all 47 species
Zm00001e021698_P001 KAN2, Zm00001e021698 G2-like GARP transcription factor 0.04 OrthoFinder output from all 47 species
Zm00001e035893_P001 Zm00001e035893 G2-like GARP transcription factor 0.05 OrthoFinder output from all 47 species
Zm00001e037731_P001 APL, WDY, Zm00001e037731 G2-like GARP transcription factor 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR001005 SANT/Myb 54 105
IPR025756 Myb_CC_LHEQLE 154 200
No external refs found!