LOC_Os07g49210.1 (CLSY, CHR38, LOC_Os07g49210)

Aliases : CLSY, CHR38, LOC_Os07g49210

Description : RDR2-polymerase accessory protein (CLSY1/2)

Gene families : OG0001013 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001013_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: LOC_Os07g49210.1

Target	Alias	Description	ECC score	Gene Family Method
Cba_g13684	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species
GSVIVT01000419001	No alias	No description available	0.06	OrthoFinder output from all 47 species
MA_932783g0010	No alias	no hits & (original description: none)	0.03	OrthoFinder output from all 47 species
Pnu_g06200	No alias	not classified & original description: none	0.04	OrthoFinder output from all 47 species
Smo86096	No alias	No description available	0.02	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0005524	ATP binding	IEA	Interproscan
MF	GO:0008168	methyltransferase activity	IEA	Interproscan
MF	GO:0016740	transferase activity	None	Extended
MF	GO:0016741	transferase activity, transferring one-carbon groups	None	Extended
MF	GO:0017076	purine nucleotide binding	None	Extended
MF	GO:0030554	adenyl nucleotide binding	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032559	adenyl ribonucleotide binding	None	Extended
MF	GO:0035639	purine ribonucleoside triphosphate binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

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Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Start	Stop
IPR006342	FkbM_mtfrase	291	445
IPR000330	SNF2_N	1321	1528
IPR001650	Helicase_C	1680	1799
IPR013216	Methyltransf_11	103	181

External Links

No external refs found!