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  5. LOC_Os08g01380.1

LOC_Os08g01380.1 (FED A, ATFD2, LOC_Os08g01380)


Aliases : FED A, ATFD2, LOC_Os08g01380

Description : ferredoxin electron carrier


Gene families : OG0000635 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000635_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os08g01380.1
Cluster HCCA: Cluster_39

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00070p00129320 evm_27.TU.AmTr_v1... Photosynthesis.photophosphorylation.linear electron... 0.11 OrthoFinder output from all 47 species
AT1G60950 FED A, ATFD2 2Fe-2S ferredoxin-like superfamily protein 0.09 OrthoFinder output from all 47 species
Aev_g01896 FED A, ATFD2 ferredoxin targeted to NADP reduction & original... 0.03 OrthoFinder output from all 47 species
Aev_g42524 FED A, ATFD2 ferredoxin targeted to NADP reduction & original... 0.05 OrthoFinder output from all 47 species
Aop_g05087 FD1, ATFD1 ferredoxin targeted to NADP reduction & original... 0.05 OrthoFinder output from all 47 species
Aspi01Gene33522.t1 ATFD3, FD3,... ferredoxin targeted to NADP reduction & original... 0.02 OrthoFinder output from all 47 species
Ceric.13G078000.1 FD1, ATFD1,... ferredoxin targeted to NADP reduction & original... 0.08 OrthoFinder output from all 47 species
Cre14.g626700 FD1, ATFD1 Photosynthesis.photophosphorylation.linear electron... 0.09 OrthoFinder output from all 47 species
Dac_g14348 FED A, ATFD2 ferredoxin targeted to NADP reduction & original... 0.03 OrthoFinder output from all 47 species
Dac_g14349 FED A, ATFD2 ferredoxin targeted to NADP reduction & original... 0.04 OrthoFinder output from all 47 species
Dcu_g18680 FED A, ATFD2 ferredoxin targeted to NADP reduction & original... 0.06 OrthoFinder output from all 47 species
Dcu_g50350 FED A, ATFD2 ferredoxin targeted to NADP reduction & original... 0.07 OrthoFinder output from all 47 species
Ehy_g01897 FD1, ATFD1 ferredoxin targeted to NADP reduction & original... 0.02 OrthoFinder output from all 47 species
Ehy_g26325 FD1, ATFD1 ferredoxin targeted to NADP reduction & original... 0.02 OrthoFinder output from all 47 species
Gb_22108 No alias ferredoxin electron carrier 0.06 OrthoFinder output from all 47 species
Gb_25335 FED A, ATFD2 ferredoxin electron carrier 0.07 OrthoFinder output from all 47 species
Len_g22357 FED A, ATFD2 ferredoxin targeted to NADP reduction & original... 0.03 OrthoFinder output from all 47 species
Len_g55855 FD1, ATFD1 ferredoxin targeted to NADP reduction & original... 0.02 OrthoFinder output from all 47 species
Mp2g15250.1 FD1, ATFD1 ferredoxin electron carrier 0.08 OrthoFinder output from all 47 species
Msp_g05782 FD1, ATFD1 ferredoxin targeted to NADP reduction & original... 0.03 OrthoFinder output from all 47 species
Ore_g14958 FED A, ATFD2 ferredoxin targeted to NADP reduction & original... 0.07 OrthoFinder output from all 47 species
Pir_g11037 FD1, ATFD1 ferredoxin targeted to NADP reduction & original... 0.03 OrthoFinder output from all 47 species
Pnu_g07739 FD1, ATFD1 ferredoxin targeted to NADP reduction & original... 0.02 OrthoFinder output from all 47 species
Pp3c4_8330V3.1 FED A, ATFD2, Pp3c4_8330 2Fe-2S ferredoxin-like superfamily protein 0.02 OrthoFinder output from all 47 species
Ppi_g00520 FED A, ATFD2 ferredoxin targeted to NADP reduction & original... 0.02 OrthoFinder output from all 47 species
Ppi_g21630 FD1, ATFD1 ferredoxin targeted to NADP reduction & original... 0.02 OrthoFinder output from all 47 species
Ppi_g62420 FD1, ATFD1 ferredoxin targeted to NADP reduction & original... 0.02 OrthoFinder output from all 47 species
Smo166487 FED A, ATFD2 Photosynthesis.photophosphorylation.linear electron... 0.03 OrthoFinder output from all 47 species
Smo236581 FED A, ATFD2 Photosynthesis.photophosphorylation.linear electron... 0.07 OrthoFinder output from all 47 species
Solyc10g044520.3.1 FED A, ATFD2,... ferredoxin electron carrier 0.11 OrthoFinder output from all 47 species
Tin_g21014 FD1, ATFD1 ferredoxin targeted to NADP reduction & original... 0.03 OrthoFinder output from all 47 species
Zm00001e029127_P002 FED A, ATFD2,... ferredoxin electron carrier 0.06 OrthoFinder output from all 47 species
Zm00001e029128_P001 FED A, ATFD2,... ferredoxin electron carrier 0.06 OrthoFinder output from all 47 species
Zm00001e029129_P001 FED A, ATFD2,... ferredoxin electron carrier 0.08 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0009055 electron transfer activity IEA Interproscan
MF GO:0051536 iron-sulfur cluster binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0005216 monoatomic ion channel activity IEP HCCA
MF GO:0005261 monoatomic cation channel activity IEP HCCA
BP GO:0006163 purine nucleotide metabolic process IEP HCCA
BP GO:0006164 purine nucleotide biosynthetic process IEP HCCA
BP GO:0006753 nucleoside phosphate metabolic process IEP HCCA
BP GO:0006754 ATP biosynthetic process IEP HCCA
MF GO:0008194 UDP-glycosyltransferase activity IEP HCCA
MF GO:0008324 monoatomic cation transmembrane transporter activity IEP HCCA
BP GO:0009117 nucleotide metabolic process IEP HCCA
BP GO:0009141 nucleoside triphosphate metabolic process IEP HCCA
BP GO:0009142 nucleoside triphosphate biosynthetic process IEP HCCA
BP GO:0009144 purine nucleoside triphosphate metabolic process IEP HCCA
BP GO:0009145 purine nucleoside triphosphate biosynthetic process IEP HCCA
BP GO:0009150 purine ribonucleotide metabolic process IEP HCCA
BP GO:0009152 purine ribonucleotide biosynthetic process IEP HCCA
BP GO:0009165 nucleotide biosynthetic process IEP HCCA
BP GO:0009199 ribonucleoside triphosphate metabolic process IEP HCCA
BP GO:0009201 ribonucleoside triphosphate biosynthetic process IEP HCCA
BP GO:0009205 purine ribonucleoside triphosphate metabolic process IEP HCCA
BP GO:0009206 purine ribonucleoside triphosphate biosynthetic process IEP HCCA
BP GO:0009259 ribonucleotide metabolic process IEP HCCA
BP GO:0009260 ribonucleotide biosynthetic process IEP HCCA
MF GO:0015075 monoatomic ion transmembrane transporter activity IEP HCCA
MF GO:0015078 proton transmembrane transporter activity IEP HCCA
MF GO:0015252 proton channel activity IEP HCCA
MF GO:0015267 channel activity IEP HCCA
MF GO:0015318 inorganic molecular entity transmembrane transporter activity IEP HCCA
BP GO:0015986 proton motive force-driven ATP synthesis IEP HCCA
MF GO:0016620 oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor IEP HCCA
MF GO:0016874 ligase activity IEP HCCA
MF GO:0016903 oxidoreductase activity, acting on the aldehyde or oxo group of donors IEP HCCA
BP GO:0018130 heterocycle biosynthetic process IEP HCCA
BP GO:0019438 aromatic compound biosynthetic process IEP HCCA
BP GO:0019637 organophosphate metabolic process IEP HCCA
BP GO:0019693 ribose phosphate metabolic process IEP HCCA
MF GO:0022803 passive transmembrane transporter activity IEP HCCA
MF GO:0022890 inorganic cation transmembrane transporter activity IEP HCCA
CC GO:0033178 proton-transporting two-sector ATPase complex, catalytic domain IEP HCCA
BP GO:0034654 nucleobase-containing compound biosynthetic process IEP HCCA
CC GO:0045261 proton-transporting ATP synthase complex, catalytic core F(1) IEP HCCA
BP GO:0046034 ATP metabolic process IEP HCCA
BP GO:0046390 ribose phosphate biosynthetic process IEP HCCA
MF GO:0046933 proton-transporting ATP synthase activity, rotational mechanism IEP HCCA
BP GO:0055086 nucleobase-containing small molecule metabolic process IEP HCCA
BP GO:0072521 purine-containing compound metabolic process IEP HCCA
BP GO:0072522 purine-containing compound biosynthetic process IEP HCCA
BP GO:0090407 organophosphate biosynthetic process IEP HCCA
CC GO:0098796 membrane protein complex IEP HCCA
BP GO:1901135 carbohydrate derivative metabolic process IEP HCCA
BP GO:1901137 carbohydrate derivative biosynthetic process IEP HCCA
BP GO:1901293 nucleoside phosphate biosynthetic process IEP HCCA
BP GO:1901362 organic cyclic compound biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR001041 2Fe-2S_ferredoxin-type 51 125
No external refs found!