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  5. LOC_Os08g05790.1

LOC_Os08g05790.1 (OMTF3, LOC_Os08g05790)


Aliases : OMTF3, LOC_Os08g05790

Description : caffeoyl-CoA 3-O-methyltransferase (CCoA-OMT)


Gene families : OG0000545 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000545_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os08g05790.1
Cluster HCCA: Cluster_157

Target Alias Description ECC score Gene Family Method Actions
Cre13.g571950 OMTF3 Cell wall.lignin.monolignol synthesis.caffeoyl-CoA... 0.02 OrthoFinder output from all 47 species
GSVIVT01027486001 No alias Cell wall.lignin.monolignol synthesis.caffeoyl-CoA... 0.04 OrthoFinder output from all 47 species
Gb_39291 No alias caffeoyl-CoA 3-O-methyltransferase (CCoA-OMT) 0.05 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0008171 O-methyltransferase activity IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003697 single-stranded DNA binding IEP HCCA
BP GO:0006950 response to stress IEP HCCA
BP GO:0006952 defense response IEP HCCA
InterPro domains Description Start Stop
IPR002935 SAM_O-MeTrfase 113 313
No external refs found!