LOC_Os08g13350.1 (LOC_Os08g13350)


Aliases : LOC_Os08g13350

Description : SHOU4-type cellulose synthase CSC-interactive protein


Gene families : OG0000929 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000929_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os08g13350.1

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00025p00154670 evm_27.TU.AmTr_v1... Uncharacterized membrane protein At1g16860... 0.04 OrthoFinder output from all 47 species
AT1G16860 No alias Ubiquitin-specific protease family C19-related protein 0.06 OrthoFinder output from all 47 species
AT1G78880 No alias Ubiquitin-specific protease family C19-related protein 0.03 OrthoFinder output from all 47 species
Adi_g014699 No alias regulatory protein *(SHOU4) involved in cellulose... 0.05 OrthoFinder output from all 47 species
Adi_g014773 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Adi_g074098 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g109835 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g11688 No alias regulatory protein *(SHOU4) involved in cellulose... 0.05 OrthoFinder output from all 47 species
Aev_g18177 No alias regulatory protein *(SHOU4) involved in cellulose... 0.03 OrthoFinder output from all 47 species
Ala_g02232 No alias regulatory protein *(SHOU4) involved in cellulose... 0.06 OrthoFinder output from all 47 species
Ala_g08556 No alias regulatory protein *(SHOU4) involved in cellulose... 0.04 OrthoFinder output from all 47 species
Ala_g14842 No alias regulatory protein *(SHOU4) involved in cellulose... 0.05 OrthoFinder output from all 47 species
Ala_g19247 No alias regulatory protein *(SHOU4) involved in cellulose... 0.02 OrthoFinder output from all 47 species
Als_g01771 No alias regulatory protein *(SHOU4) involved in cellulose... 0.05 OrthoFinder output from all 47 species
Als_g15204 No alias regulatory protein *(SHOU4) involved in cellulose... 0.07 OrthoFinder output from all 47 species
Als_g49969 No alias regulatory protein *(SHOU4) involved in cellulose... 0.05 OrthoFinder output from all 47 species
Aob_g01916 No alias regulatory protein *(SHOU4) involved in cellulose... 0.04 OrthoFinder output from all 47 species
Aob_g11781 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g29061 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g02864 No alias regulatory protein *(SHOU4) involved in cellulose... 0.06 OrthoFinder output from all 47 species
Aop_g03201 No alias regulatory protein *(SHOU4) involved in cellulose... 0.05 OrthoFinder output from all 47 species
Aop_g14554 No alias regulatory protein *(SHOU4) involved in cellulose... 0.04 OrthoFinder output from all 47 species
Aspi01Gene19318.t1 Aspi01Gene19318 regulatory protein *(SHOU4) involved in cellulose... 0.02 OrthoFinder output from all 47 species
Azfi_s0004.g008401 No alias not classified & original description: CDS=558-1895 0.04 OrthoFinder output from all 47 species
Azfi_s0073.g037099 No alias not classified & original description: CDS=1146-2774 0.04 OrthoFinder output from all 47 species
Azfi_s0078.g038230 No alias regulatory protein *(SHOU4) involved in cellulose... 0.02 OrthoFinder output from all 47 species
Cba_g05847 No alias regulatory protein *(SHOU4) involved in cellulose... 0.05 OrthoFinder output from all 47 species
Cba_g05871 No alias regulatory protein *(SHOU4) involved in cellulose... 0.03 OrthoFinder output from all 47 species
Cba_g34999 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.10G017500.1 Ceric.10G017500 regulatory protein *(SHOU4) involved in cellulose... 0.03 OrthoFinder output from all 47 species
Ceric.12G073600.1 Ceric.12G073600 regulatory protein *(SHOU4) involved in cellulose... 0.13 OrthoFinder output from all 47 species
Ceric.18G001900.1 Ceric.18G001900 regulatory protein *(SHOU4) involved in cellulose... 0.03 OrthoFinder output from all 47 species
Ceric.21G069000.1 Ceric.21G069000 not classified & original description: pacid=50602627... 0.04 OrthoFinder output from all 47 species
Dac_g01677 No alias regulatory protein *(SHOU4) involved in cellulose... 0.03 OrthoFinder output from all 47 species
Dac_g03755 No alias regulatory protein *(SHOU4) involved in cellulose... 0.04 OrthoFinder output from all 47 species
Dac_g08975 No alias regulatory protein *(SHOU4) involved in cellulose... 0.05 OrthoFinder output from all 47 species
Dac_g11604 No alias regulatory protein *(SHOU4) involved in cellulose... 0.07 OrthoFinder output from all 47 species
Dcu_g14768 No alias regulatory protein *(SHOU4) involved in cellulose... 0.03 OrthoFinder output from all 47 species
Dde_g02263 No alias regulatory protein *(SHOU4) involved in cellulose... 0.07 OrthoFinder output from all 47 species
Ehy_g03733 No alias regulatory protein *(SHOU4) involved in cellulose... 0.02 OrthoFinder output from all 47 species
Ehy_g05868 No alias regulatory protein *(SHOU4) involved in cellulose... 0.05 OrthoFinder output from all 47 species
Ehy_g07030 No alias regulatory protein *(SHOU4) involved in cellulose... 0.04 OrthoFinder output from all 47 species
Ehy_g12547 No alias regulatory protein *(SHOU4) involved in cellulose... 0.05 OrthoFinder output from all 47 species
Gb_02329 No alias SHOU4-type cellulose synthase CSC-interactive protein 0.05 OrthoFinder output from all 47 species
Gb_22203 No alias SHOU4-type cellulose synthase CSC-interactive protein 0.04 OrthoFinder output from all 47 species
Len_g04751 No alias regulatory protein *(SHOU4) involved in cellulose... 0.08 OrthoFinder output from all 47 species
Len_g34125 No alias regulatory protein *(SHOU4) involved in cellulose... 0.02 OrthoFinder output from all 47 species
Lfl_g06128 No alias regulatory protein *(SHOU4) involved in cellulose... 0.03 OrthoFinder output from all 47 species
Lfl_g15628 No alias regulatory protein *(SHOU4) involved in cellulose... 0.04 OrthoFinder output from all 47 species
Lfl_g29225 No alias regulatory protein *(SHOU4) involved in cellulose... 0.05 OrthoFinder output from all 47 species
MA_9168g0010 No alias SHOU4-type cellulose synthase CSC-interactive protein 0.04 OrthoFinder output from all 47 species
Msp_g11445 No alias regulatory protein *(SHOU4) involved in cellulose... 0.05 OrthoFinder output from all 47 species
Nbi_g05342 No alias regulatory protein *(SHOU4) involved in cellulose... 0.05 OrthoFinder output from all 47 species
Nbi_g10144 No alias regulatory protein *(SHOU4) involved in cellulose... 0.06 OrthoFinder output from all 47 species
Nbi_g25398 No alias regulatory protein *(SHOU4) involved in cellulose... 0.04 OrthoFinder output from all 47 species
Ore_g09783 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g45908 No alias regulatory protein *(SHOU4) involved in cellulose... 0.03 OrthoFinder output from all 47 species
Ppi_g01208 No alias regulatory protein *(SHOU4) involved in cellulose... 0.04 OrthoFinder output from all 47 species
Ppi_g40377 No alias regulatory protein *(SHOU4) involved in cellulose... 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0001.g000434 No alias regulatory protein *(SHOU4) involved in cellulose... 0.03 OrthoFinder output from all 47 species
Sam_g16842 No alias regulatory protein *(SHOU4) involved in cellulose... 0.02 OrthoFinder output from all 47 species
Sam_g19362 No alias regulatory protein *(SHOU4) involved in cellulose... 0.04 OrthoFinder output from all 47 species
Sam_g26311 No alias regulatory protein *(SHOU4) involved in cellulose... 0.02 OrthoFinder output from all 47 species
Smo170682 No alias Uncharacterized membrane protein At1g16860... 0.06 OrthoFinder output from all 47 species
Smo438884 No alias Uncharacterized membrane protein At1g16860... 0.06 OrthoFinder output from all 47 species
Solyc04g014680.4.1 Solyc04g014680 Uncharacterized membrane protein At1g16860... 0.05 OrthoFinder output from all 47 species
Solyc12g017450.2.1 Solyc12g017450 SHOU4-type cellulose synthase CSC-interactive protein 0.1 OrthoFinder output from all 47 species
Spa_g16426 No alias regulatory protein *(SHOU4) involved in cellulose... 0.02 OrthoFinder output from all 47 species
Spa_g16427 No alias regulatory protein *(SHOU4) involved in cellulose... 0.03 OrthoFinder output from all 47 species
Spa_g18005 No alias regulatory protein *(SHOU4) involved in cellulose... 0.03 OrthoFinder output from all 47 species
Spa_g18006 No alias regulatory protein *(SHOU4) involved in cellulose... 0.07 OrthoFinder output from all 47 species
Tin_g01046 No alias regulatory protein *(SHOU4) involved in cellulose... 0.02 OrthoFinder output from all 47 species
Tin_g25164 No alias regulatory protein *(SHOU4) involved in cellulose... 0.04 OrthoFinder output from all 47 species
Zm00001e007013_P001 Zm00001e007013 SHOU4-type cellulose synthase CSC-interactive protein 0.12 OrthoFinder output from all 47 species
Zm00001e022289_P002 Zm00001e022289 SHOU4-type cellulose synthase CSC-interactive protein 0.17 OrthoFinder output from all 47 species
Zm00001e040067_P002 Zm00001e040067 SHOU4-type cellulose synthase CSC-interactive protein 0.15 OrthoFinder output from all 47 species
Zm00001e041596_P001 Zm00001e041596 SHOU4-type cellulose synthase CSC-interactive protein 0.18 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP HCCA
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003774 cytoskeletal motor activity IEP HCCA
MF GO:0003777 microtubule motor activity IEP HCCA
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0003924 GTPase activity IEP HCCA
MF GO:0004672 protein kinase activity IEP HCCA
MF GO:0005524 ATP binding IEP HCCA
BP GO:0006468 protein phosphorylation IEP HCCA
BP GO:0006486 protein glycosylation IEP HCCA
BP GO:0006793 phosphorus metabolic process IEP HCCA
BP GO:0006796 phosphate-containing compound metabolic process IEP HCCA
BP GO:0007017 microtubule-based process IEP HCCA
BP GO:0007018 microtubule-based movement IEP HCCA
MF GO:0008017 microtubule binding IEP HCCA
MF GO:0008092 cytoskeletal protein binding IEP HCCA
MF GO:0015631 tubulin binding IEP HCCA
MF GO:0016301 kinase activity IEP HCCA
BP GO:0016310 phosphorylation IEP HCCA
MF GO:0016462 pyrophosphatase activity IEP HCCA
MF GO:0016740 transferase activity IEP HCCA
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP HCCA
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP HCCA
MF GO:0016787 hydrolase activity IEP HCCA
MF GO:0016817 hydrolase activity, acting on acid anhydrides IEP HCCA
MF GO:0016818 hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides IEP HCCA
MF GO:0017076 purine nucleotide binding IEP HCCA
MF GO:0017111 ribonucleoside triphosphate phosphatase activity IEP HCCA
BP GO:0019538 protein metabolic process IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
BP GO:0036211 protein modification process IEP HCCA
MF GO:0043168 anion binding IEP HCCA
BP GO:0043170 macromolecule metabolic process IEP HCCA
BP GO:0043412 macromolecule modification IEP HCCA
BP GO:0043413 macromolecule glycosylation IEP HCCA
BP GO:0070085 glycosylation IEP HCCA
MF GO:0097367 carbohydrate derivative binding IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA
BP GO:1901564 organonitrogen compound metabolic process IEP HCCA

No InterPro domains available for this sequence

No external refs found!