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  5. LOC_Os08g16080.1

LOC_Os08g16080.1 (LOC_Os08g16080)


Aliases : LOC_Os08g16080

Description : no hits & (original description: none)


Gene families : OG0000166 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000166_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os08g16080.1
Cluster HCCA: Cluster_133

Target Alias Description ECC score Gene Family Method Actions
LOC_Os01g07820.1 LOC_Os01g07820 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
LOC_Os01g18260.1 LOC_Os01g18260 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
LOC_Os01g18550.1 LOC_Os01g18550 no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
LOC_Os01g24530.1 LOC_Os01g24530 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
LOC_Os01g33630.1 LOC_Os01g33630 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
LOC_Os01g38810.1 LOC_Os01g38810 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
LOC_Os01g46330.1 LOC_Os01g46330 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
LOC_Os01g71910.1 LOC_Os01g71910 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
LOC_Os01g74210.1 LOC_Os01g74210 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
LOC_Os02g01420.1 LOC_Os02g01420 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
LOC_Os02g16590.1 LOC_Os02g16590 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
LOC_Os02g25370.1 LOC_Os02g25370 no hits & (original description: none) 0.06 OrthoFinder output from all 47 species
LOC_Os02g25520.1 LOC_Os02g25520 no hits & (original description: none) 0.07 OrthoFinder output from all 47 species
LOC_Os02g37620.1 LOC_Os02g37620 no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
LOC_Os02g51230.1 LOC_Os02g51230 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
LOC_Os03g27860.1 LOC_Os03g27860 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
LOC_Os03g43280.1 LOC_Os03g43280 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
LOC_Os03g54020.1 LOC_Os03g54020 no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
LOC_Os04g10020.1 LOC_Os04g10020 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
LOC_Os04g11410.1 LOC_Os04g11410 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
LOC_Os04g20450.1 LOC_Os04g20450 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
LOC_Os04g22840.1 LOC_Os04g22840 no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
LOC_Os04g23250.1 LOC_Os04g23250 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
LOC_Os04g25590.1 LOC_Os04g25590 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
LOC_Os05g03950.1 LOC_Os05g03950 no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
LOC_Os05g14000.1 LOC_Os05g14000 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
LOC_Os05g18570.1 LOC_Os05g18570 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
LOC_Os05g18990.1 LOC_Os05g18990 no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
LOC_Os05g26100.1 LOC_Os05g26100 no hits & (original description: none) 0.06 OrthoFinder output from all 47 species
LOC_Os05g39460.1 LOC_Os05g39460 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
LOC_Os05g48100.1 LOC_Os05g48100 no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
LOC_Os05g50880.1 LOC_Os05g50880 no hits & (original description: none) 0.06 OrthoFinder output from all 47 species
LOC_Os06g15050.1 LOC_Os06g15050 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
LOC_Os06g15850.1 EIN4, LOC_Os06g15850 Ethylene receptor 4 OS=Oryza sativa subsp. japonica... 0.05 OrthoFinder output from all 47 species
LOC_Os06g16900.1 LOC_Os06g16900 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
LOC_Os06g19310.1 LOC_Os06g19310 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
LOC_Os06g35350.1 LOC_Os06g35350 no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
LOC_Os07g17510.1 LOC_Os07g17510 no hits & (original description: none) 0.09 OrthoFinder output from all 47 species
LOC_Os07g31900.1 LOC_Os07g31900 no hits & (original description: none) 0.06 OrthoFinder output from all 47 species
LOC_Os07g32750.1 LOC_Os07g32750 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
LOC_Os07g34200.1 LOC_Os07g34200 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
LOC_Os07g46120.1 LOC_Os07g46120 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
LOC_Os08g03730.1 LOC_Os08g03730 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
LOC_Os08g04850.1 LOC_Os08g04850 no hits & (original description: none) 0.07 OrthoFinder output from all 47 species
LOC_Os08g08950.1 LOC_Os08g08950 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
LOC_Os08g10230.1 LOC_Os08g10230 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
LOC_Os08g17120.1 LOC_Os08g17120 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
LOC_Os08g26280.1 LOC_Os08g26280 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
LOC_Os09g04200.1 LOC_Os09g04200 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
LOC_Os09g09150.1 LOC_Os09g09150 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
LOC_Os09g11060.1 LOC_Os09g11060 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
LOC_Os09g13900.1 LOC_Os09g13900 no hits & (original description: none) 0.06 OrthoFinder output from all 47 species
LOC_Os09g17290.1 LOC_Os09g17290 no hits & (original description: none) 0.06 OrthoFinder output from all 47 species
LOC_Os09g20130.1 LOC_Os09g20130 no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
LOC_Os09g37220.1 LOC_Os09g37220 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
LOC_Os10g07562.1 LOC_Os10g07562 no hits & (original description: none) 0.07 OrthoFinder output from all 47 species
LOC_Os10g08650.1 LOC_Os10g08650 no hits & (original description: none) 0.08 OrthoFinder output from all 47 species
LOC_Os10g19326.1 LOC_Os10g19326 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
LOC_Os10g33480.1 LOC_Os10g33480 no hits & (original description: none) 0.09 OrthoFinder output from all 47 species
LOC_Os11g03950.1 LOC_Os11g03950 no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
LOC_Os11g14350.1 LOC_Os11g14350 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
LOC_Os11g23810.1 LOC_Os11g23810 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
LOC_Os11g24870.1 LOC_Os11g24870 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
LOC_Os11g26080.1 LOC_Os11g26080 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
LOC_Os11g26250.1 LOC_Os11g26250 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
LOC_Os11g35762.1 LOC_Os11g35762 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
LOC_Os11g40960.1 LOC_Os11g40960 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
LOC_Os11g41050.1 LOC_Os11g41050 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
LOC_Os11g44100.1 LOC_Os11g44100 no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
LOC_Os12g01640.1 LOC_Os12g01640 no hits & (original description: none) 0.06 OrthoFinder output from all 47 species
LOC_Os12g03020.1 LOC_Os12g03020 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
LOC_Os12g05240.1 LOC_Os12g05240 no hits & (original description: none) 0.07 OrthoFinder output from all 47 species
LOC_Os12g11600.1 LOC_Os12g11600 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
LOC_Os12g13080.1 LOC_Os12g13080 no hits & (original description: none) 0.08 OrthoFinder output from all 47 species
LOC_Os12g14200.1 LOC_Os12g14200 no hits & (original description: none) 0.06 OrthoFinder output from all 47 species
LOC_Os12g14820.1 LOC_Os12g14820 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
LOC_Os12g16400.1 LOC_Os12g16400 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
LOC_Os12g23240.1 LOC_Os12g23240 no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
LOC_Os12g24680.1 LOC_Os12g24680 no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
LOC_Os12g25300.1 LOC_Os12g25300 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
LOC_Os12g36480.1 LOC_Os12g36480 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
LOC_Os12g37240.1 LOC_Os12g37240 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
BP GO:0006508 proteolysis IEA Interproscan
MF GO:0008234 cysteine-type peptidase activity IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
BP GO:0000723 telomere maintenance IEP HCCA
MF GO:0003678 DNA helicase activity IEP HCCA
MF GO:0004386 helicase activity IEP HCCA
BP GO:0006259 DNA metabolic process IEP HCCA
BP GO:0006281 DNA repair IEP HCCA
BP GO:0006974 cellular response to DNA damage stimulus IEP HCCA
BP GO:0006996 organelle organization IEP HCCA
MF GO:0008094 ATP-dependent activity, acting on DNA IEP HCCA
BP GO:0032200 telomere organization IEP HCCA
BP GO:0033554 cellular response to stress IEP HCCA
BP GO:0051276 chromosome organization IEP HCCA
BP GO:0051716 cellular response to stimulus IEP HCCA
MF GO:0140097 catalytic activity, acting on DNA IEP HCCA
MF GO:0140657 ATP-dependent activity IEP HCCA
InterPro domains Description Start Stop
IPR003653 Peptidase_C48_C 889 990
No external refs found!