LOC_Os08g18110.1 (ALPHA-SNAP2, ASNAP,...)


Aliases : ALPHA-SNAP2, ASNAP, LOC_Os08g18110

Description : Alpha-soluble NSF attachment protein OS=Solanum tuberosum (sp|q9m5p8|snaa_soltu : 331.0)


Gene families : OG0003310 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003310_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os08g18110.1

Target Alias Description ECC score Gene Family Method Actions
AT3G56190 ALPHA-SNAP2, ASNAP alpha-soluble NSF attachment protein 2 0.05 OrthoFinder output from all 47 species
Adi_g100715 ALPHA-SNAP2, ASNAP regulatory protein *(alpha-SNAP/SEC17) of vesicle... 0.02 OrthoFinder output from all 47 species
Adi_g117402 ALPHA-SNAP2, ASNAP regulatory protein *(alpha-SNAP/SEC17) of vesicle... 0.02 OrthoFinder output from all 47 species
Aev_g03871 ALPHA-SNAP2, ASNAP regulatory protein *(alpha-SNAP/SEC17) of vesicle... 0.02 OrthoFinder output from all 47 species
Als_g01598 ALPHA-SNAP2, ASNAP regulatory protein *(alpha-SNAP/SEC17) of vesicle... 0.03 OrthoFinder output from all 47 species
Cba_g10758 ALPHA-SNAP2, ASNAP regulatory protein *(alpha-SNAP/SEC17) of vesicle... 0.04 OrthoFinder output from all 47 species
Cpa|evm.model.tig00021463.20 ALPHA-SNAP2, ASNAP Alpha-soluble NSF attachment protein OS=Vitis vinifera 0.02 OrthoFinder output from all 47 species
Dcu_g09217 ALPHA-SNAP2, ASNAP regulatory protein *(alpha-SNAP/SEC17) of vesicle... 0.03 OrthoFinder output from all 47 species
GSVIVT01032725001 ALPHA-SNAP2, ASNAP Alpha-soluble NSF attachment protein OS=Vitis vinifera 0.03 OrthoFinder output from all 47 species
Mp3g14330.1 ALPHA-SNAP2, ASNAP Alpha-soluble NSF attachment protein 2 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
Msp_g08063 ALPHA-SNAP2, ASNAP regulatory protein *(alpha-SNAP/SEC17) of vesicle... 0.03 OrthoFinder output from all 47 species
Sam_g14144 No alias regulatory protein *(alpha-SNAP/SEC17) of vesicle... 0.02 OrthoFinder output from all 47 species
Solyc06g050770.3.1 ALPHA-SNAP2,... Alpha-soluble NSF attachment protein OS=Solanum... 0.05 OrthoFinder output from all 47 species
Zm00001e022100_P001 ALPHA-SNAP2,... Alpha-soluble NSF attachment protein OS=Solanum... 0.06 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP HCCA
MF GO:0003924 GTPase activity IEP HCCA
BP GO:0006810 transport IEP HCCA
BP GO:0006886 intracellular protein transport IEP HCCA
BP GO:0008104 protein localization IEP HCCA
BP GO:0015031 protein transport IEP HCCA
BP GO:0016192 vesicle-mediated transport IEP HCCA
BP GO:0016579 protein deubiquitination IEP HCCA
MF GO:0017076 purine nucleotide binding IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
BP GO:0033036 macromolecule localization IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
MF GO:0043168 anion binding IEP HCCA
BP GO:0045184 establishment of protein localization IEP HCCA
BP GO:0046907 intracellular transport IEP HCCA
BP GO:0051179 localization IEP HCCA
BP GO:0051234 establishment of localization IEP HCCA
BP GO:0051641 cellular localization IEP HCCA
BP GO:0051649 establishment of localization in cell IEP HCCA
BP GO:0070646 protein modification by small protein removal IEP HCCA
BP GO:0070647 protein modification by small protein conjugation or removal IEP HCCA
BP GO:0070727 cellular macromolecule localization IEP HCCA
BP GO:0071702 organic substance transport IEP HCCA
BP GO:0071705 nitrogen compound transport IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:0097367 carbohydrate derivative binding IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA

No InterPro domains available for this sequence

No external refs found!