Aliases : LOC_Os08g23120
Description : Heterogeneous nuclear ribonucleoprotein 1 OS=Arabidopsis thaliana (sp|q8w034|rnp1_arath : 127.0)
Gene families : OG0000120 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000120_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AT5G55550 | No alias | RNA-binding (RRM/RBD/RNP motifs) family protein | 0.03 | OrthoFinder output from all 47 species | |
| Adi_g008733 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Adi_g013859 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Adi_g022676 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Adi_g102181 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aev_g05367 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ala_g01865 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Als_g08511 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Als_g08530 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Aob_g12260 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Cba_g34526 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ceric.35G060600.1 | Ceric.35G060600 | not classified & original description: pacid=50581737... | 0.02 | OrthoFinder output from all 47 species | |
| Cre07.g330300 | No alias | Heterogeneous nuclear ribonucleoprotein 1 OS=Arabidopsis thaliana | 0.02 | OrthoFinder output from all 47 species | |
| Dac_g01661 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Dac_g33428 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Dcu_g33739 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ehy_g06861 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ehy_g07658 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ehy_g07789 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Len_g03813 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Lfl_g10917 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Lfl_g13117 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Msp_g21023 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Nbi_g07522 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Pir_g09717 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Sam_g11715 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Solyc12g014600.2.1 | Solyc12g014600 | Heterogeneous nuclear ribonucleoprotein 1 OS=Arabidopsis... | 0.03 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003676 | nucleic acid binding | IEA | Interproscan |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0004559 | alpha-mannosidase activity | IEP | HCCA |
| MF | GO:0004571 | mannosyl-oligosaccharide 1,2-alpha-mannosidase activity | IEP | HCCA |
| CC | GO:0005575 | cellular_component | IEP | HCCA |
| CC | GO:0005789 | endoplasmic reticulum membrane | IEP | HCCA |
| BP | GO:0006810 | transport | IEP | HCCA |
| BP | GO:0006886 | intracellular protein transport | IEP | HCCA |
| BP | GO:0006888 | endoplasmic reticulum to Golgi vesicle-mediated transport | IEP | HCCA |
| BP | GO:0007034 | vacuolar transport | IEP | HCCA |
| BP | GO:0008104 | protein localization | IEP | HCCA |
| BP | GO:0015031 | protein transport | IEP | HCCA |
| MF | GO:0015923 | mannosidase activity | IEP | HCCA |
| MF | GO:0015924 | mannosyl-oligosaccharide mannosidase activity | IEP | HCCA |
| CC | GO:0016020 | membrane | IEP | HCCA |
| BP | GO:0016192 | vesicle-mediated transport | IEP | HCCA |
| CC | GO:0030014 | CCR4-NOT complex | IEP | HCCA |
| CC | GO:0031090 | organelle membrane | IEP | HCCA |
| BP | GO:0033036 | macromolecule localization | IEP | HCCA |
| BP | GO:0045184 | establishment of protein localization | IEP | HCCA |
| BP | GO:0046907 | intracellular transport | IEP | HCCA |
| BP | GO:0048193 | Golgi vesicle transport | IEP | HCCA |
| BP | GO:0051179 | localization | IEP | HCCA |
| BP | GO:0051234 | establishment of localization | IEP | HCCA |
| BP | GO:0051641 | cellular localization | IEP | HCCA |
| BP | GO:0051649 | establishment of localization in cell | IEP | HCCA |
| BP | GO:0070727 | cellular macromolecule localization | IEP | HCCA |
| BP | GO:0071702 | organic substance transport | IEP | HCCA |
| BP | GO:0071705 | nitrogen compound transport | IEP | HCCA |
| CC | GO:0140535 | intracellular protein-containing complex | IEP | HCCA |
| No external refs found! |
