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  5. LOC_Os08g24590.1

LOC_Os08g24590.1 (LOC_Os08g24590)


Aliases : LOC_Os08g24590

Description : no hits & (original description: none)


Gene families : OG0000166 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000166_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os08g24590.1
Cluster HCCA: Cluster_5

Target Alias Description ECC score Gene Family Method Actions
LOC_Os01g04140.1 LOC_Os01g04140 no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
LOC_Os01g07820.1 LOC_Os01g07820 no hits & (original description: none) 0.08 OrthoFinder output from all 47 species
LOC_Os01g08730.1 LOC_Os01g08730 no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
LOC_Os01g18200.1 LOC_Os01g18200 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
LOC_Os01g19960.1 LOC_Os01g19960 no hits & (original description: none) 0.06 OrthoFinder output from all 47 species
LOC_Os01g20190.1 LOC_Os01g20190 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
LOC_Os01g21480.1 LOC_Os01g21480 no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
LOC_Os01g28184.1 LOC_Os01g28184 no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
LOC_Os01g46330.1 LOC_Os01g46330 no hits & (original description: none) 0.08 OrthoFinder output from all 47 species
LOC_Os01g71910.1 LOC_Os01g71910 no hits & (original description: none) 0.08 OrthoFinder output from all 47 species
LOC_Os01g74210.1 LOC_Os01g74210 no hits & (original description: none) 0.08 OrthoFinder output from all 47 species
LOC_Os02g16590.1 LOC_Os02g16590 no hits & (original description: none) 0.09 OrthoFinder output from all 47 species
LOC_Os02g25560.1 LOC_Os02g25560 no hits & (original description: none) 0.07 OrthoFinder output from all 47 species
LOC_Os02g37620.1 LOC_Os02g37620 no hits & (original description: none) 0.06 OrthoFinder output from all 47 species
LOC_Os02g51230.1 LOC_Os02g51230 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
LOC_Os03g07680.1 LOC_Os03g07680 no hits & (original description: none) 0.1 OrthoFinder output from all 47 species
LOC_Os03g27520.1 LOC_Os03g27520 no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
LOC_Os03g43280.1 LOC_Os03g43280 no hits & (original description: none) 0.11 OrthoFinder output from all 47 species
LOC_Os04g06100.1 LOC_Os04g06100 no hits & (original description: none) 0.08 OrthoFinder output from all 47 species
LOC_Os04g20450.1 LOC_Os04g20450 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
LOC_Os04g22840.1 LOC_Os04g22840 no hits & (original description: none) 0.06 OrthoFinder output from all 47 species
LOC_Os04g25590.1 LOC_Os04g25590 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
LOC_Os04g29440.1 LOC_Os04g29440 no hits & (original description: none) 0.06 OrthoFinder output from all 47 species
LOC_Os04g34820.1 LOC_Os04g34820 no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
LOC_Os05g03950.1 LOC_Os05g03950 no hits & (original description: none) 0.06 OrthoFinder output from all 47 species
LOC_Os05g14000.1 LOC_Os05g14000 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
LOC_Os05g14460.1 LOC_Os05g14460 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
LOC_Os05g18570.1 LOC_Os05g18570 no hits & (original description: none) 0.11 OrthoFinder output from all 47 species
LOC_Os05g18990.1 LOC_Os05g18990 no hits & (original description: none) 0.06 OrthoFinder output from all 47 species
LOC_Os05g27860.1 LOC_Os05g27860 no hits & (original description: none) 0.09 OrthoFinder output from all 47 species
LOC_Os05g39460.1 LOC_Os05g39460 no hits & (original description: none) 0.09 OrthoFinder output from all 47 species
LOC_Os05g50880.1 LOC_Os05g50880 no hits & (original description: none) 0.09 OrthoFinder output from all 47 species
LOC_Os06g10380.1 LOC_Os06g10380 no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
LOC_Os06g15050.1 LOC_Os06g15050 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
LOC_Os06g21150.1 LOC_Os06g21150 no hits & (original description: none) 0.06 OrthoFinder output from all 47 species
LOC_Os06g27900.1 LOC_Os06g27900 no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
LOC_Os06g35350.1 LOC_Os06g35350 no hits & (original description: none) 0.06 OrthoFinder output from all 47 species
LOC_Os06g42500.1 LOC_Os06g42500 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
LOC_Os06g42580.1 LOC_Os06g42580 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
LOC_Os07g03350.1 LOC_Os07g03350 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
LOC_Os07g06030.1 LOC_Os07g06030 no hits & (original description: none) 0.06 OrthoFinder output from all 47 species
LOC_Os07g09540.1 LOC_Os07g09540 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
LOC_Os07g11850.1 LOC_Os07g11850 no hits & (original description: none) 0.08 OrthoFinder output from all 47 species
LOC_Os07g17510.1 LOC_Os07g17510 no hits & (original description: none) 0.09 OrthoFinder output from all 47 species
LOC_Os07g30750.1 LOC_Os07g30750 no hits & (original description: none) 0.06 OrthoFinder output from all 47 species
LOC_Os07g32750.1 LOC_Os07g32750 no hits & (original description: none) 0.13 OrthoFinder output from all 47 species
LOC_Os07g34090.1 LOC_Os07g34090 no hits & (original description: none) 0.09 OrthoFinder output from all 47 species
LOC_Os07g39610.1 LOC_Os07g39610 no hits & (original description: none) 0.11 OrthoFinder output from all 47 species
LOC_Os08g03730.1 LOC_Os08g03730 no hits & (original description: none) 0.09 OrthoFinder output from all 47 species
LOC_Os08g08670.1 LOC_Os08g08670 no hits & (original description: none) 0.08 OrthoFinder output from all 47 species
LOC_Os08g12280.1 LOC_Os08g12280 no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
LOC_Os08g17120.1 LOC_Os08g17120 no hits & (original description: none) 0.08 OrthoFinder output from all 47 species
LOC_Os08g27180.1 LOC_Os08g27180 no hits & (original description: none) 0.08 OrthoFinder output from all 47 species
LOC_Os08g36730.1 LOC_Os08g36730 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
LOC_Os09g02090.1 LOC_Os09g02090 no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
LOC_Os09g03040.1 LOC_Os09g03040 no hits & (original description: none) 0.07 OrthoFinder output from all 47 species
LOC_Os09g09060.1 LOC_Os09g09060 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
LOC_Os09g11060.1 LOC_Os09g11060 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
LOC_Os09g14260.1 LOC_Os09g14260 Glutathione S-transferase T3 OS=Arabidopsis thaliana... 0.04 OrthoFinder output from all 47 species
LOC_Os10g16800.1 LOC_Os10g16800 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
LOC_Os10g19326.1 LOC_Os10g19326 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
LOC_Os11g03950.1 LOC_Os11g03950 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
LOC_Os11g23810.1 LOC_Os11g23810 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
LOC_Os11g24870.1 LOC_Os11g24870 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
LOC_Os11g31180.1 LOC_Os11g31180 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
LOC_Os11g40960.1 LOC_Os11g40960 no hits & (original description: none) 0.11 OrthoFinder output from all 47 species
LOC_Os11g44100.1 LOC_Os11g44100 no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
LOC_Os12g14200.1 LOC_Os12g14200 no hits & (original description: none) 0.08 OrthoFinder output from all 47 species
LOC_Os12g14820.1 LOC_Os12g14820 no hits & (original description: none) 0.08 OrthoFinder output from all 47 species
LOC_Os12g22910.1 LOC_Os12g22910 no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
LOC_Os12g23240.1 LOC_Os12g23240 no hits & (original description: none) 0.15 OrthoFinder output from all 47 species
LOC_Os12g24680.1 LOC_Os12g24680 no hits & (original description: none) 0.11 OrthoFinder output from all 47 species
LOC_Os12g26070.1 LOC_Os12g26070 no hits & (original description: none) 0.06 OrthoFinder output from all 47 species
LOC_Os12g37240.1 LOC_Os12g37240 no hits & (original description: none) 0.12 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
BP GO:0006508 proteolysis IEA Interproscan
MF GO:0008234 cysteine-type peptidase activity IEA Interproscan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR003653 Peptidase_C48_C 821 932
No external refs found!