LOC_Os08g30590.1 (LOC_Os08g30590)


Aliases : LOC_Os08g30590

Description : no hits & (original description: none)


Gene families : OG0000892 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000892_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os08g30590.1

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00022p00036270 evm_27.TU.AmTr_v1... No description available 0.02 OrthoFinder output from all 47 species
GSVIVT01031897001 No alias No description available 0.03 OrthoFinder output from all 47 species
LOC_Os07g41890.1 LOC_Os07g41890 no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
Solyc01g073840.1.1 Solyc01g073840 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Solyc01g073890.3.1 Solyc01g073890 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0003712 transcription coregulator activity IEP HCCA
MF GO:0004402 histone acetyltransferase activity IEP HCCA
MF GO:0004518 nuclease activity IEP HCCA
MF GO:0004519 endonuclease activity IEP HCCA
MF GO:0004521 endoribonuclease activity IEP HCCA
MF GO:0004525 ribonuclease III activity IEP HCCA
MF GO:0004540 ribonuclease activity IEP HCCA
BP GO:0006396 RNA processing IEP HCCA
MF GO:0008080 N-acetyltransferase activity IEP HCCA
MF GO:0016407 acetyltransferase activity IEP HCCA
MF GO:0016410 N-acyltransferase activity IEP HCCA
MF GO:0016891 endoribonuclease activity, producing 5'-phosphomonoesters IEP HCCA
MF GO:0016893 endonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 5'-phosphomonoesters IEP HCCA
CC GO:0018995 host cellular component IEP HCCA
CC GO:0019867 outer membrane IEP HCCA
MF GO:0032296 double-stranded RNA-specific ribonuclease activity IEP HCCA
CC GO:0033643 host cell part IEP HCCA
CC GO:0033646 host intracellular part IEP HCCA
CC GO:0033647 host intracellular organelle IEP HCCA
CC GO:0033648 host intracellular membrane-bounded organelle IEP HCCA
MF GO:0034212 peptide N-acetyltransferase activity IEP HCCA
CC GO:0042025 host cell nucleus IEP HCCA
MF GO:0043169 cation binding IEP HCCA
MF GO:0046872 metal ion binding IEP HCCA
MF GO:0046914 transition metal ion binding IEP HCCA
MF GO:0061733 peptide-lysine-N-acetyltransferase activity IEP HCCA
CC GO:0110165 cellular anatomical entity IEP HCCA
InterPro domains Description Start Stop
IPR004146 DC1 18 66
IPR004146 DC1 274 321
No external refs found!