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  5. LOC_Os08g34360.1

LOC_Os08g34360.1 (LOC_Os08g34360)


Aliases : LOC_Os08g34360

Description : transcription factor (AP2)


Gene families : OG0000110 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000110_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os08g34360.1
Cluster HCCA: Cluster_73

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00019p00086450 ADAP,... RNA biosynthesis.transcriptional activation.AP2/ERF... 0.03 OrthoFinder output from all 47 species
AMTR_s00019p00225230 AIL5, EMK, CHO1,... RNA biosynthesis.transcriptional activation.AP2/ERF... 0.02 OrthoFinder output from all 47 species
AMTR_s00066p00028460 BBM,... RNA biosynthesis.transcriptional activation.AP2/ERF... 0.04 OrthoFinder output from all 47 species
AMTR_s00101p00022740 WRI1, ATWRI1,... RNA biosynthesis.transcriptional activation.AP2/ERF... 0.03 OrthoFinder output from all 47 species
AMTR_s00202p00017170 WRI1, ATWRI1,... External stimuli response.biotic... 0.01 OrthoFinder output from all 47 species
AT3G54320 WRI1, ATWRI1, ASML1, WRI Integrase-type DNA-binding superfamily protein 0.03 OrthoFinder output from all 47 species
AT5G17430 BBM Integrase-type DNA-binding superfamily protein 0.03 OrthoFinder output from all 47 species
Adi_g056777 WRI1, ATWRI1, ASML1, WRI AP2-type transcription factor *(WRI/AIL) & original... 0.02 OrthoFinder output from all 47 species
Adi_g058146 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g084762 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g088509 WRI1, ATWRI1, ASML1, WRI AP2-type transcription factor *(WRI/AIL) & original... 0.02 OrthoFinder output from all 47 species
Aev_g10118 AP2, FLO2, FL1 AP2-type transcription factor *(WRI/AIL) & original... 0.02 OrthoFinder output from all 47 species
Aev_g39456 PLT2 AP2-type transcription factor *(WRI/AIL) & original... 0.02 OrthoFinder output from all 47 species
Als_g14197 No alias AP2-type transcription factor *(WRI/AIL) & original... 0.02 OrthoFinder output from all 47 species
Als_g14935 No alias AP2-type transcription factor *(WRI/AIL) & original... 0.02 OrthoFinder output from all 47 species
Aob_g17577 No alias AP2-type transcription factor *(WRI/AIL) & original... 0.02 OrthoFinder output from all 47 species
Aob_g20859 PLT2 AP2-type transcription factor *(WRI/AIL) & original... 0.03 OrthoFinder output from all 47 species
Aop_g07593 No alias AP2-type transcription factor *(WRI/AIL) & original... 0.02 OrthoFinder output from all 47 species
Aop_g38906 BBM AP2-type transcription factor *(WRI/AIL) & original... 0.02 OrthoFinder output from all 47 species
Aop_g40928 PLT2 AP2-type transcription factor *(WRI/AIL) & original... 0.03 OrthoFinder output from all 47 species
Aspi01Gene03089.t1 WRI1, ATWRI1,... AP2-type transcription factor *(WRI/AIL) & original... 0.03 OrthoFinder output from all 47 species
Aspi01Gene04754.t1 Aspi01Gene04754 AP2-type transcription factor *(WRI/AIL) & original... 0.03 OrthoFinder output from all 47 species
Aspi01Gene18157.t1 Aspi01Gene18157 AP2-type transcription factor *(WRI/AIL) & original... 0.03 OrthoFinder output from all 47 species
Aspi01Gene20073.t1 PLT2, Aspi01Gene20073 AP2-type transcription factor *(WRI/AIL) & original... 0.03 OrthoFinder output from all 47 species
Aspi01Gene38022.t1 Aspi01Gene38022 AP2-type transcription factor *(WRI/AIL) & original... 0.03 OrthoFinder output from all 47 species
Aspi01Gene38120.t1 PLT2, Aspi01Gene38120 AP2-type transcription factor *(WRI/AIL) & original... 0.03 OrthoFinder output from all 47 species
Aspi01Gene59204.t1 Aspi01Gene59204 RAM1-dependent transcription factor *(WRI5) & original... 0.02 OrthoFinder output from all 47 species
Aspi01Gene72710.t1 PLT2, Aspi01Gene72710 AP2-type transcription factor *(WRI/AIL) & original... 0.05 OrthoFinder output from all 47 species
Ceric.03G054600.1 ADAP, Ceric.03G054600 AP2-type transcription factor *(WRI/AIL) & original... 0.03 OrthoFinder output from all 47 species
Ceric.10G056200.1 PLT2, Ceric.10G056200 AP2-type transcription factor *(WRI/AIL) & original... 0.03 OrthoFinder output from all 47 species
Ceric.14G068200.1 AP2, FLO2, FL1,... AP2-type transcription factor *(WRI/AIL) & original... 0.03 OrthoFinder output from all 47 species
Ceric.1Z150100.1 AP2, FLO2, FL1,... AP2-type transcription factor *(WRI/AIL) & original... 0.03 OrthoFinder output from all 47 species
Ceric.32G008600.1 BBM, Ceric.32G008600 AP2-type transcription factor *(WRI/AIL) & original... 0.03 OrthoFinder output from all 47 species
Cre08.g383000 TOE3 No description available 0.01 OrthoFinder output from all 47 species
Cre08.g385350 HRE1 No description available 0.01 OrthoFinder output from all 47 species
Dac_g35453 ADAP RAM1-dependent transcription factor *(WRI5) & original... 0.03 OrthoFinder output from all 47 species
Dcu_g31441 WRI1, ATWRI1, ASML1, WRI RAM1-dependent transcription factor *(WRI5) & original... 0.02 OrthoFinder output from all 47 species
Dcu_g33754 PLT2 AP2-type transcription factor *(WRI/AIL) & original... 0.02 OrthoFinder output from all 47 species
Dcu_g41387 PLT2 AP2-type transcription factor *(WRI/AIL) & original... 0.02 OrthoFinder output from all 47 species
Dde_g30317 No alias AP2-type transcription factor *(WRI/AIL) & original... 0.04 OrthoFinder output from all 47 species
Dde_g42409 AP2, FLO2, FL1 AP2-type transcription factor *(WRI/AIL) & original... 0.03 OrthoFinder output from all 47 species
Ehy_g17161 No alias AP2-type transcription factor *(WRI/AIL) & original... 0.02 OrthoFinder output from all 47 species
Ehy_g17996 No alias AP2-type transcription factor *(WRI/AIL) & original... 0.04 OrthoFinder output from all 47 species
Ehy_g31994 BBM AP2-type transcription factor *(WRI/AIL) & original... 0.04 OrthoFinder output from all 47 species
GSVIVT01002536001 PLT3, AIL6 RNA biosynthesis.transcriptional activation.AP2/ERF... 0.03 OrthoFinder output from all 47 species
GSVIVT01016097001 ADAP RNA biosynthesis.transcriptional activation.AP2/ERF... 0.03 OrthoFinder output from all 47 species
GSVIVT01016352001 RAP2.7, TOE1 RNA biosynthesis.transcriptional activation.AP2/ERF... 0.05 OrthoFinder output from all 47 species
GSVIVT01023697001 ADAP RNA biosynthesis.transcriptional activation.AP2/ERF... 0.03 OrthoFinder output from all 47 species
Gb_05487 DRG, CKC, CKC1, ANT transcription factor (AP2) 0.02 OrthoFinder output from all 47 species
Gb_18139 No alias transcription factor (AP2) 0.03 OrthoFinder output from all 47 species
Gb_33988 AP2, FLO2, FL1 transcription factor (AP2) 0.04 OrthoFinder output from all 47 species
LOC_Os01g67410.1 PLT1, LOC_Os01g67410 transcription factor (AP2) 0.05 OrthoFinder output from all 47 species
LOC_Os02g40070.1 PLT2, LOC_Os02g40070 transcription factor (AP2) 0.04 OrthoFinder output from all 47 species
LOC_Os03g07940.1 LOC_Os03g07940 transcription factor (AP2) 0.03 OrthoFinder output from all 47 species
LOC_Os06g05340.1 LOC_Os06g05340 transcription factor (AP2). RAM1-dependent transcription... 0.05 OrthoFinder output from all 47 species
LOC_Os11g19060.1 BBM, LOC_Os11g19060 transcription factor (AP2) 0.04 OrthoFinder output from all 47 species
Len_g16372 AP2, FLO2, FL1 AP2-type transcription factor *(WRI/AIL) & original... 0.04 OrthoFinder output from all 47 species
Len_g17922 PLT2 AP2-type transcription factor *(WRI/AIL) & original... 0.02 OrthoFinder output from all 47 species
Len_g44143 No alias RAM1-dependent transcription factor *(WRI5) & original... 0.03 OrthoFinder output from all 47 species
Len_g45546 WRI1, ATWRI1, ASML1, WRI AP2-type transcription factor *(WRI/AIL) & original... 0.02 OrthoFinder output from all 47 species
Len_g46694 AP2, FLO2, FL1 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Len_g46833 ADAP AP2-type transcription factor *(WRI/AIL) & original... 0.02 OrthoFinder output from all 47 species
Len_g51118 BBM AP2-type transcription factor *(WRI/AIL) & original... 0.03 OrthoFinder output from all 47 species
Lfl_g17116 No alias AP2-type transcription factor *(WRI/AIL) & original... 0.02 OrthoFinder output from all 47 species
Lfl_g29068 PLT2 AP2-type transcription factor *(WRI/AIL) & original... 0.02 OrthoFinder output from all 47 species
MA_10005612g0010 ADAP no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
MA_2193g0020 AP2, FLO2, FL1 transcription factor (AP2) 0.03 OrthoFinder output from all 47 species
MA_30905g0010 WRI1, ATWRI1, ASML1, WRI transcription factor (AP2) 0.03 OrthoFinder output from all 47 species
MA_31722g0010 DRG, CKC, CKC1, ANT transcription factor (AP2) 0.02 OrthoFinder output from all 47 species
MA_3387414g0010 No alias transcription factor (DREB) 0.03 OrthoFinder output from all 47 species
MA_8090186g0010 AP2, FLO2, FL1 transcription factor (AP2) 0.03 OrthoFinder output from all 47 species
MA_86195g0010 PLT2 transcription factor (AP2) 0.04 OrthoFinder output from all 47 species
MA_95471g0010 No alias transcription factor (AP2) 0.03 OrthoFinder output from all 47 species
Mp7g13270.1 ADAP transcription factor (AP2) 0.02 OrthoFinder output from all 47 species
Mp8g11450.1 No alias transcription factor (AP2) 0.02 OrthoFinder output from all 47 species
Msp_g18324 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g31091 PLT2 AP2-type transcription factor *(WRI/AIL) & original... 0.03 OrthoFinder output from all 47 species
Msp_g32091 No alias AP2-type transcription factor *(WRI/AIL) & original... 0.04 OrthoFinder output from all 47 species
Nbi_g09452 BBM AP2-type transcription factor *(WRI/AIL) & original... 0.02 OrthoFinder output from all 47 species
Ore_g17459 No alias AP2-type transcription factor *(WRI/AIL) & original... 0.05 OrthoFinder output from all 47 species
Ore_g26599 No alias AP2-type transcription factor *(WRI/AIL) & original... 0.02 OrthoFinder output from all 47 species
Ore_g26951 AP2, FLO2, FL1 AP2-type transcription factor *(WRI/AIL) & original... 0.03 OrthoFinder output from all 47 species
Ore_g27093 WRI1, ATWRI1, ASML1, WRI AP2-type transcription factor *(WRI/AIL) & original... 0.03 OrthoFinder output from all 47 species
Ore_g27094 WRI1, ATWRI1, ASML1, WRI AP2-type transcription factor *(WRI/AIL) & original... 0.03 OrthoFinder output from all 47 species
Ore_g27835 No alias AP2-type transcription factor *(WRI/AIL) & original... 0.02 OrthoFinder output from all 47 species
Ore_g35099 WRI1, ATWRI1, ASML1, WRI not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g44006 RAP2.7, TOE1 AP2-type transcription factor *(WRI/AIL) & original... 0.02 OrthoFinder output from all 47 species
Pnu_g15320 AP2, FLO2, FL1 AP2-type transcription factor *(WRI/AIL) & original... 0.02 OrthoFinder output from all 47 species
Pnu_g21617 No alias AP2-type transcription factor *(WRI/AIL) & original... 0.02 OrthoFinder output from all 47 species
Pnu_g22096 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g23616 AP2, FLO2, FL1 AP2-type transcription factor *(WRI/AIL) & original... 0.03 OrthoFinder output from all 47 species
Pp3c22_17870V3.1 Pp3c22_17870 target of early activation tagged (EAT) 2 0.01 OrthoFinder output from all 47 species
Ppi_g59880 No alias AP2-type transcription factor *(WRI/AIL) & original... 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0021.g008387 AP2, FLO2, FL1 AP2-type transcription factor *(WRI/AIL) & original... 0.03 OrthoFinder output from all 47 species
Sam_g37210 No alias AP2-type transcription factor *(WRI/AIL) & original... 0.02 OrthoFinder output from all 47 species
Solyc03g044300.3.1 AP2, FLO2, FL1,... transcription factor (AP2) 0.05 OrthoFinder output from all 47 species
Solyc03g117720.3.1 ADAP, Solyc03g117720 transcription factor (AP2) 0.04 OrthoFinder output from all 47 species
Solyc04g049800.3.1 RAP2.7, TOE1,... transcription factor (AP2) 0.02 OrthoFinder output from all 47 species
Solyc05g051380.4.1 PLT3, AIL6,... transcription factor (AP2) 0.02 OrthoFinder output from all 47 species
Solyc06g075510.4.1 RAP2.7, TOE1,... transcription factor (AP2) 0.03 OrthoFinder output from all 47 species
Solyc09g007260.4.1 RAP2.7, TOE1,... transcription factor (AP2) 0.02 OrthoFinder output from all 47 species
Solyc11g008560.2.1 BBM, Solyc11g008560 transcription factor (AP2) 0.04 OrthoFinder output from all 47 species
Solyc11g061750.2.1 PLT2, Solyc11g061750 transcription factor (AP2) 0.03 OrthoFinder output from all 47 species
Spa_g10818 PLT2 AP2-type transcription factor *(WRI/AIL) & original... 0.02 OrthoFinder output from all 47 species
Spa_g13908 No alias RAM1-dependent transcription factor *(WRI5) & original... 0.02 OrthoFinder output from all 47 species
Tin_g31835 PLT2 AP2-type transcription factor *(WRI/AIL) & original... 0.02 OrthoFinder output from all 47 species
Tin_g34262 ADAP RAM1-dependent transcription factor *(WRI5) & original... 0.03 OrthoFinder output from all 47 species
Zm00001e018951_P001 PLT2, Zm00001e018951 transcription factor (AP2) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEA Interproscan
BP GO:0006355 regulation of DNA-templated transcription IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0004180 carboxypeptidase activity IEP HCCA
MF GO:0004185 serine-type carboxypeptidase activity IEP HCCA
MF GO:0004568 chitinase activity IEP HCCA
BP GO:0006022 aminoglycan metabolic process IEP HCCA
BP GO:0006026 aminoglycan catabolic process IEP HCCA
BP GO:0006030 chitin metabolic process IEP HCCA
BP GO:0006032 chitin catabolic process IEP HCCA
BP GO:0006040 amino sugar metabolic process IEP HCCA
MF GO:0008061 chitin binding IEP HCCA
MF GO:0008238 exopeptidase activity IEP HCCA
BP GO:0016567 protein ubiquitination IEP HCCA
BP GO:0016998 cell wall macromolecule catabolic process IEP HCCA
BP GO:0032446 protein modification by small protein conjugation IEP HCCA
BP GO:0044036 cell wall macromolecule metabolic process IEP HCCA
BP GO:0046348 amino sugar catabolic process IEP HCCA
MF GO:0070008 serine-type exopeptidase activity IEP HCCA
BP GO:1901071 glucosamine-containing compound metabolic process IEP HCCA
BP GO:1901072 glucosamine-containing compound catabolic process IEP HCCA
BP GO:1901136 carbohydrate derivative catabolic process IEP HCCA
BP GO:1901565 organonitrogen compound catabolic process IEP HCCA
InterPro domains Description Start Stop
IPR001471 AP2/ERF_dom 25 75
No external refs found!