LOC_Os08g36140.1 (EDA3, LOC_Os08g36140)


Aliases : EDA3, LOC_Os08g36140

Description : PSA2 protein involved in PS-I assembly


Gene families : OG0006306 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0006306_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os08g36140.1

Target Alias Description ECC score Gene Family Method Actions
Adi_g001496 EDA3 protein involved in PS-I assembly *(PSA2) & original... 0.02 OrthoFinder output from all 47 species
Aev_g02822 EDA3 protein involved in PS-I assembly *(PSA2) & original... 0.04 OrthoFinder output from all 47 species
Ala_g20902 EDA3 protein involved in PS-I assembly *(PSA2) & original... 0.03 OrthoFinder output from all 47 species
Aob_g35831 EDA3 protein involved in PS-I assembly *(PSA2) & original... 0.03 OrthoFinder output from all 47 species
Aspi01Gene08964.t1 EDA3, Aspi01Gene08964 protein involved in PS-I assembly *(PSA2) & original... 0.03 OrthoFinder output from all 47 species
Ceric.04G083000.1 EDA3, Ceric.04G083000 protein involved in PS-I assembly *(PSA2) & original... 0.02 OrthoFinder output from all 47 species
Cpa|evm.model.tig00020943.29 No alias Photosynthesis.photophosphorylation.photosystem... 0.02 OrthoFinder output from all 47 species
Cre11.g475850 EDA3 Photosynthesis.photophosphorylation.photosystem... 0.02 OrthoFinder output from all 47 species
Dcu_g41306 EDA3 protein involved in PS-I assembly *(PSA2) & original... 0.03 OrthoFinder output from all 47 species
Dde_g15497 EDA3 protein involved in PS-I assembly *(PSA2) & original... 0.03 OrthoFinder output from all 47 species
GSVIVT01025384001 EDA3 Photosynthesis.photophosphorylation.photosystem... 0.05 OrthoFinder output from all 47 species
Lfl_g03693 EDA3 protein involved in PS-I assembly *(PSA2) & original... 0.02 OrthoFinder output from all 47 species
Nbi_g10835 EDA3 protein involved in PS-I assembly *(PSA2) & original... 0.04 OrthoFinder output from all 47 species
Ore_g19770 EDA3 protein involved in PS-I assembly *(PSA2) & original... 0.03 OrthoFinder output from all 47 species
Ore_g19771 EDA3 protein involved in PS-I assembly *(PSA2) & original... 0.05 OrthoFinder output from all 47 species
Pnu_g24228 EDA3 protein involved in PS-I assembly *(PSA2) & original... 0.02 OrthoFinder output from all 47 species
Ppi_g62171 EDA3 protein involved in PS-I assembly *(PSA2) & original... 0.02 OrthoFinder output from all 47 species
Sam_g40405 No alias protein involved in PS-I assembly *(PSA2) & original... 0.02 OrthoFinder output from all 47 species
Sam_g40406 No alias protein involved in PS-I assembly *(PSA2) & original... 0.02 OrthoFinder output from all 47 species
Smo159064 EDA3 Photosynthesis.photophosphorylation.photosystem... 0.04 OrthoFinder output from all 47 species
Zm00001e003758_P001 Zm00001e003758 Protein PHOTOSYSTEM I ASSEMBLY 2, chloroplastic OS=Zea... 0.07 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003723 RNA binding IEP HCCA
MF GO:0004325 ferrochelatase activity IEP HCCA
MF GO:0004525 ribonuclease III activity IEP HCCA
MF GO:0004721 phosphoprotein phosphatase activity IEP HCCA
BP GO:0006778 porphyrin-containing compound metabolic process IEP HCCA
BP GO:0006779 porphyrin-containing compound biosynthetic process IEP HCCA
BP GO:0006783 heme biosynthetic process IEP HCCA
MF GO:0008080 N-acetyltransferase activity IEP HCCA
MF GO:0008138 protein tyrosine/serine/threonine phosphatase activity IEP HCCA
CC GO:0009521 photosystem IEP HCCA
CC GO:0009523 photosystem II IEP HCCA
CC GO:0009654 photosystem II oxygen evolving complex IEP HCCA
BP GO:0015979 photosynthesis IEP HCCA
BP GO:0016311 dephosphorylation IEP HCCA
MF GO:0016407 acetyltransferase activity IEP HCCA
MF GO:0016410 N-acyltransferase activity IEP HCCA
MF GO:0016788 hydrolase activity, acting on ester bonds IEP HCCA
MF GO:0016791 phosphatase activity IEP HCCA
CC GO:0019898 extrinsic component of membrane IEP HCCA
MF GO:0032296 double-stranded RNA-specific ribonuclease activity IEP HCCA
BP GO:0033013 tetrapyrrole metabolic process IEP HCCA
BP GO:0033014 tetrapyrrole biosynthetic process IEP HCCA
BP GO:0042168 heme metabolic process IEP HCCA
BP GO:0042440 pigment metabolic process IEP HCCA
BP GO:0046148 pigment biosynthetic process IEP HCCA
CC GO:1990204 oxidoreductase complex IEP HCCA

No InterPro domains available for this sequence

No external refs found!