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  5. LOC_Os08g36560.1

LOC_Os08g36560.1 (LOC_Os08g36560)


Aliases : LOC_Os08g36560

Description : Transmembrane emp24 domain-containing protein p24delta3 OS=Arabidopsis thaliana (sp|q6idl4|p24d3_arath : 120.0)


Gene families : OG0001151 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001151_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os08g36560.1
Cluster HCCA: Cluster_13

Target Alias Description ECC score Gene Family Method Actions
AT1G09580 No alias emp24/gp25L/p24 family/GOLD family protein 0.03 OrthoFinder output from all 47 species
AT1G21900 No alias emp24/gp25L/p24 family/GOLD family protein 0.03 OrthoFinder output from all 47 species
AT3G29070 No alias emp24/gp25L/p24 family/GOLD family protein 0.02 OrthoFinder output from all 47 species
Adi_g000998 No alias component *(p24-delta) of GPI-anchor protein cargo... 0.03 OrthoFinder output from all 47 species
Aev_g01966 No alias component *(p24-delta) of GPI-anchor protein cargo... 0.02 OrthoFinder output from all 47 species
Azfi_s2700.g112748 No alias component *(p24-delta) of GPI-anchor protein cargo... 0.04 OrthoFinder output from all 47 species
Cba_g04407 No alias component *(p24-delta) of GPI-anchor protein cargo... 0.03 OrthoFinder output from all 47 species
Ceric.04G018000.1 Ceric.04G018000 component *(p24-delta) of GPI-anchor protein cargo... 0.02 OrthoFinder output from all 47 species
GSVIVT01008892001 No alias Vesicle trafficking.Coat protein I (COPI) coatomer... 0.03 OrthoFinder output from all 47 species
Nbi_g04013 No alias component *(p24-delta) of GPI-anchor protein cargo... 0.02 OrthoFinder output from all 47 species
Ore_g06816 No alias component *(p24-delta) of GPI-anchor protein cargo... 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0039.g012264 No alias component *(p24-delta) of GPI-anchor protein cargo... 0.02 OrthoFinder output from all 47 species
Tin_g03079 No alias component *(p24-delta) of GPI-anchor protein cargo... 0.03 OrthoFinder output from all 47 species
Zm00001e010842_P001 Zm00001e010842 p24-delta COPI trafficking regulator protein 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
CC GO:0000145 exocyst IEP HCCA
BP GO:0000271 polysaccharide biosynthetic process IEP HCCA
MF GO:0000287 magnesium ion binding IEP HCCA
MF GO:0003779 actin binding IEP HCCA
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0004427 inorganic diphosphate phosphatase activity IEP HCCA
MF GO:0004650 polygalacturonase activity IEP HCCA
MF GO:0004842 ubiquitin-protein transferase activity IEP HCCA
MF GO:0004857 enzyme inhibitor activity IEP HCCA
CC GO:0005575 cellular_component IEP HCCA
CC GO:0005737 cytoplasm IEP HCCA
BP GO:0005975 carbohydrate metabolic process IEP HCCA
BP GO:0005976 polysaccharide metabolic process IEP HCCA
BP GO:0006073 cellular glucan metabolic process IEP HCCA
BP GO:0006793 phosphorus metabolic process IEP HCCA
BP GO:0006796 phosphate-containing compound metabolic process IEP HCCA
BP GO:0006887 exocytosis IEP HCCA
MF GO:0008092 cytoskeletal protein binding IEP HCCA
BP GO:0008150 biological_process IEP HCCA
BP GO:0008152 metabolic process IEP HCCA
BP GO:0009250 glucan biosynthetic process IEP HCCA
BP GO:0009987 cellular process IEP HCCA
BP GO:0016051 carbohydrate biosynthetic process IEP HCCA
BP GO:0016567 protein ubiquitination IEP HCCA
MF GO:0016740 transferase activity IEP HCCA
MF GO:0016759 cellulose synthase activity IEP HCCA
MF GO:0016760 cellulose synthase (UDP-forming) activity IEP HCCA
MF GO:0016787 hydrolase activity IEP HCCA
MF GO:0019787 ubiquitin-like protein transferase activity IEP HCCA
BP GO:0030243 cellulose metabolic process IEP HCCA
BP GO:0030244 cellulose biosynthetic process IEP HCCA
MF GO:0030599 pectinesterase activity IEP HCCA
BP GO:0032446 protein modification by small protein conjugation IEP HCCA
BP GO:0032940 secretion by cell IEP HCCA
BP GO:0033692 cellular polysaccharide biosynthetic process IEP HCCA
BP GO:0034637 cellular carbohydrate biosynthetic process IEP HCCA
MF GO:0035251 UDP-glucosyltransferase activity IEP HCCA
BP GO:0036211 protein modification process IEP HCCA
BP GO:0042545 cell wall modification IEP HCCA
BP GO:0043170 macromolecule metabolic process IEP HCCA
BP GO:0043412 macromolecule modification IEP HCCA
BP GO:0044042 glucan metabolic process IEP HCCA
BP GO:0044237 cellular metabolic process IEP HCCA
BP GO:0044238 primary metabolic process IEP HCCA
BP GO:0044262 cellular carbohydrate metabolic process IEP HCCA
BP GO:0044264 cellular polysaccharide metabolic process IEP HCCA
BP GO:0045229 external encapsulating structure organization IEP HCCA
MF GO:0046527 glucosyltransferase activity IEP HCCA
BP GO:0046903 secretion IEP HCCA
BP GO:0051273 beta-glucan metabolic process IEP HCCA
BP GO:0051274 beta-glucan biosynthetic process IEP HCCA
MF GO:0052689 carboxylic ester hydrolase activity IEP HCCA
BP GO:0070647 protein modification by small protein conjugation or removal IEP HCCA
BP GO:0071554 cell wall organization or biogenesis IEP HCCA
BP GO:0071555 cell wall organization IEP HCCA
BP GO:0071704 organic substance metabolic process IEP HCCA
CC GO:0099023 vesicle tethering complex IEP HCCA
BP GO:0140352 export from cell IEP HCCA
MF GO:0140678 molecular function inhibitor activity IEP HCCA
InterPro domains Description Start Stop
IPR009038 GOLD_dom 23 108
No external refs found!