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  5. LOC_Os08g38240.1

LOC_Os08g38240.1 (LOC_Os08g38240)


Aliases : LOC_Os08g38240

Description : component CPFS6/CFIm68 of Cleavage Factor I (CF-Im) complex


Gene families : OG0002089 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002089_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os08g38240.1
Cluster HCCA: Cluster_58

Target Alias Description ECC score Gene Family Method Actions
AT5G55670 No alias RNA-binding (RRM/RBD/RNP motifs) family protein 0.02 OrthoFinder output from all 47 species
Adi_g081353 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g34624 No alias component *(CPFS6/CFIm68) of Cleavage Factor I (CF-Im)... 0.02 OrthoFinder output from all 47 species
Aob_g14769 No alias component *(CPFS6/CFIm68) of Cleavage Factor I (CF-Im)... 0.02 OrthoFinder output from all 47 species
Aob_g17567 No alias component *(CPFS6/CFIm68) of Cleavage Factor I (CF-Im)... 0.03 OrthoFinder output from all 47 species
Azfi_s0076.g037919 No alias component *(CPFS6/CFIm68) of Cleavage Factor I (CF-Im)... 0.03 OrthoFinder output from all 47 species
Ceric.10G054500.1 Ceric.10G054500 component *(CPFS6/CFIm68) of Cleavage Factor I (CF-Im)... 0.05 OrthoFinder output from all 47 species
Cre08.g384950 No alias No description available 0.01 OrthoFinder output from all 47 species
Gb_03117 No alias component CPFS6/CFIm68 of Cleavage Factor I (CF-Im) complex 0.02 OrthoFinder output from all 47 species
Gb_22175 No alias component CPFS6/CFIm68 of Cleavage Factor I (CF-Im) complex 0.01 OrthoFinder output from all 47 species
Lfl_g03230 No alias component *(CPFS6/CFIm68) of Cleavage Factor I (CF-Im)... 0.03 OrthoFinder output from all 47 species
MA_202067g0010 No alias component CPFS6/CFIm68 of Cleavage Factor I (CF-Im) complex 0.03 OrthoFinder output from all 47 species
MA_20828g0010 No alias component CPFS6/CFIm68 of Cleavage Factor I (CF-Im) complex 0.02 OrthoFinder output from all 47 species
Mp3g08890.1 No alias component CPFS6/CFIm68 of Cleavage Factor I (CF-Im) complex 0.03 OrthoFinder output from all 47 species
Ore_g09611 No alias component *(CPFS6/CFIm68) of Cleavage Factor I (CF-Im)... 0.02 OrthoFinder output from all 47 species
Pir_g11326 No alias component *(CPFS6/CFIm68) of Cleavage Factor I (CF-Im)... 0.03 OrthoFinder output from all 47 species
Pnu_g13506 No alias component *(CPFS6/CFIm68) of Cleavage Factor I (CF-Im)... 0.03 OrthoFinder output from all 47 species
Solyc07g065510.4.1 Solyc07g065510 component CPFS6/CFIm68 of Cleavage Factor I (CF-Im) complex 0.04 OrthoFinder output from all 47 species
Zm00001e003418_P002 Zm00001e003418 component CPFS6/CFIm68 of Cleavage Factor I (CF-Im) complex 0.04 OrthoFinder output from all 47 species
Zm00001e024332_P002 Zm00001e024332 component CPFS6/CFIm68 of Cleavage Factor I (CF-Im) complex 0.06 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEP HCCA
MF GO:0008237 metallopeptidase activity IEP HCCA
InterPro domains Description Start Stop
IPR000504 RRM_dom 185 254
No external refs found!