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LOC_Os08g38410.1 (LOC_Os08g38410)


Aliases : LOC_Os08g38410

Description : Heterogeneous nuclear ribonucleoprotein 1 OS=Arabidopsis thaliana (sp|q8w034|rnp1_arath : 132.0)


Gene families : OG0000120 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000120_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os08g38410.1

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00061p00188860 evm_27.TU.AmTr_v1... Heterogeneous nuclear ribonucleoprotein 1 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
Adi_g022676 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g059747 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g088961 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g102182 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g14658 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene42378.t2 Aspi01Gene42378 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g19823 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ceric.14G090500.1 Ceric.14G090500 not classified & original description: pacid=50634831... 0.03 OrthoFinder output from all 47 species
Cpa|evm.model.tig00001130.27 No alias Heterogeneous nuclear ribonucleoprotein 1 OS=Arabidopsis thaliana 0.01 OrthoFinder output from all 47 species
Cre07.g330300 No alias Heterogeneous nuclear ribonucleoprotein 1 OS=Arabidopsis thaliana 0.01 OrthoFinder output from all 47 species
Dcu_g44206 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ehy_g06861 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g07384 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Smo172407 No alias Heterogeneous nuclear ribonucleoprotein 1 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
Spa_g11266 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Zm00001e032753_P002 Zm00001e032753 Heterogeneous nuclear ribonucleoprotein 1 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0007034 vacuolar transport IEP HCCA
BP GO:0046907 intracellular transport IEP HCCA
BP GO:0051641 cellular localization IEP HCCA
BP GO:0051649 establishment of localization in cell IEP HCCA
InterPro domains Description Start Stop
IPR000504 RRM_dom 25 90
IPR000504 RRM_dom 113 170
No external refs found!