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  5. LOC_Os08g40940.1

LOC_Os08g40940.1 (LOC_Os08g40940)


Aliases : LOC_Os08g40940

Description : no hits & (original description: none)


Gene families : OG0000548 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000548_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os08g40940.1
Cluster HCCA: Cluster_73

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00002p00255400 evm_27.TU.AmTr_v1... No description available 0.03 OrthoFinder output from all 47 species
AT5G10580 No alias Protein of unknown function, DUF599 0.04 OrthoFinder output from all 47 species
AT5G24790 No alias Protein of unknown function, DUF599 0.02 OrthoFinder output from all 47 species
AT5G46060 No alias Protein of unknown function, DUF599 0.02 OrthoFinder output from all 47 species
Als_g12993 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g21060 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g03400 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene25351.t1 Aspi01Gene25351 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene25945.t1 Aspi01Gene25945 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene26529.t1 Aspi01Gene26529 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene37432.t1 Aspi01Gene37432 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene56804.t1 Aspi01Gene56804 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ceric.04G026600.1 Ceric.04G026600 not classified & original description: pacid=50631280... 0.04 OrthoFinder output from all 47 species
Dac_g34756 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dac_g40425 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g01205 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g17770 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ehy_g25781 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ehy_g29757 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
GSVIVT01034340001 No alias No description available 0.03 OrthoFinder output from all 47 species
GSVIVT01035558001 No alias No description available 0.03 OrthoFinder output from all 47 species
Gb_09348 No alias no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Gb_09351 No alias no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
Gb_19192 No alias no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
Gb_38231 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
LOC_Os09g15780.1 LOC_Os09g15780 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
LOC_Os09g32100.1 LOC_Os09g32100 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Len_g05628 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g10869 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
MA_26720g0010 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Nbi_g01736 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Nbi_g02713 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g27189 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g31363 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g38648 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g01553 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g47908 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pnu_g19553 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g46513 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0008.g004185 No alias not classified & original description: CDS=213-944 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0135.g022373 No alias not classified & original description: CDS=333-1151 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0141.g022761 No alias not classified & original description: CDS=253-1047 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0146.g023064 No alias not classified & original description: CDS=642-1325 0.03 OrthoFinder output from all 47 species
Smo101278 No alias No description available 0.02 OrthoFinder output from all 47 species
Solyc02g077540.4.1 Solyc02g077540 no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
Solyc03g079980.2.1 Solyc03g079980 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Spa_g06949 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g10551 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g20278 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g48898 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g10500 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Zm00001e003584_P002 Zm00001e003584 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Zm00001e020142_P001 Zm00001e020142 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0005516 calmodulin binding IEP HCCA
BP GO:0055114 obsolete oxidation-reduction process IEP HCCA
InterPro domains Description Start Stop
IPR006747 DUF599 11 223
No external refs found!