LOC_Os08g42570.1 (LOC_Os08g42570)


Aliases : LOC_Os08g42570

Description : no hits & (original description: none)


Gene families : OG0000125 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000125_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os08g42570.1

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00013p00068760 evm_27.TU.AmTr_v1... UPF0481 protein At3g47200 OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
AMTR_s00013p00075010 evm_27.TU.AmTr_v1... UPF0481 protein At3g47200 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
AMTR_s00016p00254630 evm_27.TU.AmTr_v1... UPF0481 protein At3g47200 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
AMTR_s00023p00152840 evm_27.TU.AmTr_v1... No description available 0.04 OrthoFinder output from all 47 species
AMTR_s00023p00152880 evm_27.TU.AmTr_v1... No description available 0.04 OrthoFinder output from all 47 species
AMTR_s00023p00153750 evm_27.TU.AmTr_v1... UPF0481 protein At3g47200 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
AMTR_s00023p00153970 evm_27.TU.AmTr_v1... No description available 0.04 OrthoFinder output from all 47 species
AMTR_s00023p00168910 evm_27.TU.AmTr_v1... No description available 0.03 OrthoFinder output from all 47 species
AMTR_s00023p00170960 evm_27.TU.AmTr_v1... No description available 0.03 OrthoFinder output from all 47 species
AMTR_s00023p00171000 evm_27.TU.AmTr_v1... No description available 0.03 OrthoFinder output from all 47 species
AMTR_s00023p00171820 evm_27.TU.AmTr_v1... No description available 0.05 OrthoFinder output from all 47 species
AMTR_s00033p00169500 evm_27.TU.AmTr_v1... Putative UPF0481 protein At3g02645 OS=Arabidopsis thaliana 0.04 OrthoFinder output from all 47 species
AMTR_s00033p00171210 evm_27.TU.AmTr_v1... Putative UPF0481 protein At3g02645 OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
AMTR_s00278p00010750 evm_27.TU.AmTr_v1... No description available 0.04 OrthoFinder output from all 47 species
AT1G65985 No alias Plant protein of unknown function (DUF247) 0.03 OrthoFinder output from all 47 species
AT3G44710 No alias Plant protein of unknown function (DUF247) 0.04 OrthoFinder output from all 47 species
AT3G47250 No alias Plant protein of unknown function (DUF247) 0.04 OrthoFinder output from all 47 species
AT3G50130 No alias Plant protein of unknown function (DUF247) 0.04 OrthoFinder output from all 47 species
AT3G50160 No alias Plant protein of unknown function (DUF247) 0.03 OrthoFinder output from all 47 species
AT5G22540 No alias Plant protein of unknown function (DUF247) 0.05 OrthoFinder output from all 47 species
AT5G22550 No alias Plant protein of unknown function (DUF247) 0.04 OrthoFinder output from all 47 species
Aev_g02345 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g09662 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g12369 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g13693 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g19466 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g26067 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g29496 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g21124 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g21179 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g26134 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g26669 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g28439 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g02375 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g06239 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g14217 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g31495 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene08488.t1 Aspi01Gene08488 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene08489.t1 Aspi01Gene08489 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene08490.t1 Aspi01Gene08490 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene08493.t1 Aspi01Gene08493 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene19103.t1 Aspi01Gene19103 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aspi01Gene22026.t1 Aspi01Gene22026 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene48412.t1 Aspi01Gene48412 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene49158.t1 Aspi01Gene49158 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene53577.t1 Aspi01Gene53577 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene55382.t1 Aspi01Gene55382 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene61822.t1 Aspi01Gene61822 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene70527.t1 Aspi01Gene70527 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aspi01Gene72945.t1 Aspi01Gene72945 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g01047 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g03828 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.08G043100.1 Ceric.08G043100 not classified & original description: pacid=50638846... 0.05 OrthoFinder output from all 47 species
Dac_g00185 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g07573 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dac_g36449 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dac_g37257 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dac_g39129 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g41114 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dde_g03345 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g19005 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g19655 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g26945 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g27578 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dde_g48193 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g52253 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01014791001 No alias UPF0481 protein At3g47200 OS=Arabidopsis thaliana 0.06 OrthoFinder output from all 47 species
GSVIVT01026858001 No alias No description available 0.02 OrthoFinder output from all 47 species
GSVIVT01033984001 No alias UPF0481 protein At3g47200 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
Gb_03494 No alias no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Gb_06307 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Gb_08676 No alias UPF0481 protein At3g47200 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Gb_15961 No alias Putative UPF0481 protein At3g02645 OS=Arabidopsis... 0.04 OrthoFinder output from all 47 species
Gb_20970 No alias Putative UPF0481 protein At3g02645 OS=Arabidopsis... 0.04 OrthoFinder output from all 47 species
Gb_27805 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Gb_28287 No alias Putative UPF0481 protein At3g02645 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
Gb_28782 No alias Putative UPF0481 protein At3g02645 OS=Arabidopsis... 0.05 OrthoFinder output from all 47 species
Gb_36110 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Gb_37289 No alias Putative UPF0481 protein At3g02645 OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species
LOC_Os01g38120.1 LOC_Os01g38120 UPF0481 protein At3g47200 OS=Arabidopsis thaliana... 0.05 OrthoFinder output from all 47 species
LOC_Os04g42650.1 LOC_Os04g42650 UPF0481 protein At3g47200 OS=Arabidopsis thaliana... 0.04 OrthoFinder output from all 47 species
LOC_Os11g33394.1 LOC_Os11g33394 UPF0481 protein At3g47200 OS=Arabidopsis thaliana... 0.05 OrthoFinder output from all 47 species
LOC_Os11g33942.1 LOC_Os11g33942 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
LOC_Os11g33970.1 LOC_Os11g33970 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
LOC_Os11g34090.1 LOC_Os11g34090 UPF0481 protein At3g47200 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Len_g35601 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g42582 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g07758 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
MA_10426384g0010 No alias UPF0481 protein At3g47200 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
MA_10434321g0020 No alias UPF0481 protein At3g47200 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
MA_10436908g0010 No alias Putative UPF0481 protein At3g02645 OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species
MA_10436979g0010 No alias Putative UPF0481 protein At3g02645 OS=Arabidopsis... 0.1 OrthoFinder output from all 47 species
MA_155516g0010 No alias no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
MA_180326g0010 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
MA_301279g0010 No alias Putative UPF0481 protein At3g02645 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
MA_413488g0010 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
MA_6919317g0010 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
MA_6958038g0010 No alias Putative UPF0481 protein At3g02645 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
MA_92471g0010 No alias Putative UPF0481 protein At3g02645 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
MA_9718623g0010 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Mp1g28190.1 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Mp3g02930.1 No alias no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
Mp7g16570.1 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Msp_g27647 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g22087 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Nbi_g26666 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g19917 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g26242 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g37513 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g50677 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Pnu_g09735 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pnu_g20007 No alias not classified & original description: none 0.08 OrthoFinder output from all 47 species
Ppi_g21408 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0044.g012986 No alias not classified & original description: CDS=1-1557 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0088.g018539 No alias not classified & original description: CDS=1-1374 0.05 OrthoFinder output from all 47 species
Sacu_v1.1_s0185.g024999 No alias not classified & original description: CDS=1-447 0.02 OrthoFinder output from all 47 species
Solyc02g093020.3.1 Solyc02g093020 UPF0481 protein At3g47200 OS=Arabidopsis thaliana... 0.05 OrthoFinder output from all 47 species
Solyc03g117260.2.1 Solyc03g117260 Putative UPF0481 protein At3g02645 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
Solyc04g016020.1.1 Solyc04g016020 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Solyc04g019313.1.1 Solyc04g019313 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Solyc06g068340.3.1 Solyc06g068340 Putative UPF0481 protein At3g02645 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
Spa_g00455 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g26898 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Tin_g04556 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g15406 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Zm00001e024850_P001 Zm00001e024850 UPF0481 protein At3g47200 OS=Arabidopsis thaliana... 0.04 OrthoFinder output from all 47 species
Zm00001e036342_P001 Zm00001e036342 Putative UPF0481 protein At3g02645 OS=Arabidopsis... 0.06 OrthoFinder output from all 47 species
Zm00001e041187_P001 Zm00001e041187 UPF0481 protein At3g47200 OS=Arabidopsis thaliana... 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0003993 acid phosphatase activity IEP HCCA
MF GO:0016787 hydrolase activity IEP HCCA
MF GO:0016791 phosphatase activity IEP HCCA
MF GO:0042578 phosphoric ester hydrolase activity IEP HCCA
MF GO:0043565 sequence-specific DNA binding IEP HCCA
InterPro domains Description Start Stop
IPR004158 DUF247_pln 80 478
No external refs found!