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  5. LOC_Os09g05020.2

LOC_Os09g05020.2 (LOC_Os09g05020)


Aliases : LOC_Os09g05020

Description : atypical dual-specificity phosphatase (PFA-DSP)


Gene families : OG0001443 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001443_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os09g05020.2

Target Alias Description ECC score Gene Family Method Actions
AT2G32960 No alias Phosphotyrosine protein phosphatases superfamily protein 0.02 OrthoFinder output from all 47 species
AT3G02800 No alias Tyrosine phosphatase family protein 0.05 OrthoFinder output from all 47 species
Adi_g010109 No alias atypical PTP phosphatase *(PFA-DSP) & original description: none 0.05 OrthoFinder output from all 47 species
Aspi01Gene57076.t2 Aspi01Gene57076 atypical PTP phosphatase *(PFA-DSP) & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g19479 No alias atypical PTP phosphatase *(PFA-DSP) & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g22398 No alias atypical PTP phosphatase *(PFA-DSP) & original description: none 0.05 OrthoFinder output from all 47 species
Dde_g16381 No alias atypical PTP phosphatase *(PFA-DSP) & original description: none 0.05 OrthoFinder output from all 47 species
GSVIVT01030509001 No alias Tyrosine-protein phosphatase DSP1 OS=Arabidopsis thaliana 0.04 OrthoFinder output from all 47 species
LOC_Os02g53160.1 LOC_Os02g53160 atypical dual-specificity phosphatase (PFA-DSP) 0.04 OrthoFinder output from all 47 species
Len_g02759 No alias atypical PTP phosphatase *(PFA-DSP) & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g22869 No alias atypical PTP phosphatase *(PFA-DSP) & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g40255 No alias atypical PTP phosphatase *(PFA-DSP) & original description: none 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003677 DNA binding IEP HCCA
MF GO:0003700 DNA-binding transcription factor activity IEP HCCA
MF GO:0005488 binding IEP HCCA
BP GO:0006355 regulation of DNA-templated transcription IEP HCCA
BP GO:0008037 cell recognition IEP HCCA
BP GO:0009889 regulation of biosynthetic process IEP HCCA
BP GO:0010468 regulation of gene expression IEP HCCA
BP GO:0010556 regulation of macromolecule biosynthetic process IEP HCCA
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP HCCA
BP GO:0019222 regulation of metabolic process IEP HCCA
BP GO:0031323 regulation of cellular metabolic process IEP HCCA
BP GO:0031326 regulation of cellular biosynthetic process IEP HCCA
MF GO:0043565 sequence-specific DNA binding IEP HCCA
BP GO:0048544 recognition of pollen IEP HCCA
BP GO:0050789 regulation of biological process IEP HCCA
BP GO:0050794 regulation of cellular process IEP HCCA
BP GO:0051171 regulation of nitrogen compound metabolic process IEP HCCA
BP GO:0051252 regulation of RNA metabolic process IEP HCCA
BP GO:0060255 regulation of macromolecule metabolic process IEP HCCA
BP GO:0065007 biological regulation IEP HCCA
BP GO:0080090 regulation of primary metabolic process IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:0140110 transcription regulator activity IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
BP GO:1903506 regulation of nucleic acid-templated transcription IEP HCCA
BP GO:2001141 regulation of RNA biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR004861 Siw14-like 63 215
No external refs found!