LOC_Os09g10200.1 (ASK1, ATSKP1, UIP1,...)

Aliases : ASK1, ATSKP1, UIP1, SKP1, SKP1A, LOC_Os09g10200

Description : target protein binding component SKP1/ASK1 of SKP1-CUL1-FBX (SCF) E3 ligase complexes

Gene families : OG0000379 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000379_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: LOC_Os09g10200.1

Target	Alias	Description	ECC score	Gene Family Method
AT2G03190	ASK16, SK16	SKP1-like 16	0.02	OrthoFinder output from all 47 species
AT2G20160	MEO, ASK17	E3 ubiquitin ligase SCF complex subunit SKP1/ASK1 family protein	0.02	OrthoFinder output from all 47 species
AT2G25700	ASK3, SK3	SKP1-like 3	0.01	OrthoFinder output from all 47 species
AT3G21830	SK8, ASK8	SKP1-like 8	0.02	OrthoFinder output from all 47 species
Aob_g34703	ASK2, SKP1B	ASK-type linker component of SCF E3 ubiquitin ligase...	0.02	OrthoFinder output from all 47 species
LOC_Os07g05150.1	ASK2, SKP1B,...	target protein binding component SKP1/ASK1 of...	0.01	OrthoFinder output from all 47 species
LOC_Os07g43180.1	ASK2, SKP1B,...	target protein binding component SKP1/ASK1 of...	0.01	OrthoFinder output from all 47 species
Msp_g40582	ASK2, SKP1B	not classified & original description: none	0.04	OrthoFinder output from all 47 species
Solyc11g008400.2.1	ASK4, SK4, Solyc11g008400	target protein binding component SKP1/ASK1 of...	0.01	OrthoFinder output from all 47 species
Zm00001e011287_P001	ASK2, SKP1B,...	target protein binding component SKP1/ASK1 of...	0.01	OrthoFinder output from all 47 species
Zm00001e011288_P001	ASK2, SKP1B,...	target protein binding component SKP1/ASK1 of...	0.01	OrthoFinder output from all 47 species
Zm00001e020534_P002	ASK2, SKP1B,...	target protein binding component SKP1/ASK1 of...	0.01	OrthoFinder output from all 47 species
Zm00001e042493_P001	ASK2, SKP1B,...	target protein binding component SKP1/ASK1 of...	0.01	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
BP	GO:0006508	proteolysis	None	Extended
BP	GO:0006511	ubiquitin-dependent protein catabolic process	IEA	Interproscan
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009056	catabolic process	None	Extended
BP	GO:0009057	macromolecule catabolic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0019538	protein metabolic process	None	Extended
BP	GO:0019941	modification-dependent protein catabolic process	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
BP	GO:0043632	modification-dependent macromolecule catabolic process	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044248	cellular catabolic process	None	Extended
BP	GO:0044260	cellular macromolecule metabolic process	None	Extended
BP	GO:0044265	cellular macromolecule catabolic process	None	Extended
BP	GO:0051603	proteolysis involved in protein catabolic process	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended
BP	GO:1901575	organic substance catabolic process	None	Extended

Toggle parental

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Start	Stop
IPR016073	Skp1_comp_POZ	14	72
IPR016072	Skp1_comp_dimer	118	164

External Links

No external refs found!