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  5. LOC_Os09g20150.1

LOC_Os09g20150.1 (LOC_Os09g20150)


Aliases : LOC_Os09g20150

Description : no hits & (original description: none)


Gene families : OG0000892 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000892_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os09g20150.1
Cluster HCCA: Cluster_84

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00012p00263580 evm_27.TU.AmTr_v1... No description available 0.05 OrthoFinder output from all 47 species
AMTR_s00012p00263620 evm_27.TU.AmTr_v1... No description available 0.05 OrthoFinder output from all 47 species
AMTR_s00022p00034890 evm_27.TU.AmTr_v1... No description available 0.01 OrthoFinder output from all 47 species
AMTR_s00022p00036270 evm_27.TU.AmTr_v1... No description available 0.05 OrthoFinder output from all 47 species
AMTR_s00030p00098310 evm_27.TU.AmTr_v1... No description available 0.03 OrthoFinder output from all 47 species
AMTR_s00044p00069570 evm_27.TU.AmTr_v1... No description available 0.03 OrthoFinder output from all 47 species
AMTR_s00059p00175720 evm_27.TU.AmTr_v1... No description available 0.04 OrthoFinder output from all 47 species
AT2G37805 No alias No description available 0.03 OrthoFinder output from all 47 species
AT2G37820 No alias Cysteine/Histidine-rich C1 domain family protein 0.03 OrthoFinder output from all 47 species
AT2G42060 No alias Cysteine/Histidine-rich C1 domain family protein 0.04 OrthoFinder output from all 47 species
AT5G43520 No alias Cysteine/Histidine-rich C1 domain family protein 0.04 OrthoFinder output from all 47 species
Adi_g057572 No alias E3 ubiquitin ligase *(AIRP1) & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g13719 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g16526 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.33G006200.1 Ceric.33G006200 not classified & original description: pacid=50606483... 0.03 OrthoFinder output from all 47 species
Dac_g14868 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g31920 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01025366001 No alias No description available 0.03 OrthoFinder output from all 47 species
GSVIVT01034093001 No alias No description available 0.04 OrthoFinder output from all 47 species
LOC_Os07g42040.1 LOC_Os07g42040 no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
LOC_Os08g31280.1 LOC_Os08g31280 no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
LOC_Os09g31980.1 LOC_Os09g31980 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
MA_18827g0010 No alias no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
MA_18827g0020 No alias no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
MA_279737g0010 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Msp_g09555 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g43990 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0009.g004401 No alias not classified & original description: CDS=1-1194 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0063.g015605 No alias not classified & original description: CDS=1-1329 0.04 OrthoFinder output from all 47 species
Solyc01g073780.2.1 Solyc01g073780 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Solyc01g073840.1.1 Solyc01g073840 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Solyc01g073890.3.1 Solyc01g073890 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Solyc06g072460.1.1 Solyc06g072460 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Solyc09g011270.4.1 Solyc09g011270 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Spa_g21651 AtAIRP1, AIRP1 E3 ubiquitin ligase *(AIRP1) & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g21972 No alias E3 ubiquiTin ligase *(AIRP1) & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e021370_P001 Zm00001e021370 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0005506 iron ion binding IEP HCCA
BP GO:0006720 isoprenoid metabolic process IEP HCCA
BP GO:0006952 defense response IEP HCCA
BP GO:0008299 isoprenoid biosynthetic process IEP HCCA
MF GO:0010333 terpene synthase activity IEP HCCA
MF GO:0016491 oxidoreductase activity IEP HCCA
MF GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen IEP HCCA
MF GO:0016838 carbon-oxygen lyase activity, acting on phosphates IEP HCCA
MF GO:0020037 heme binding IEP HCCA
MF GO:0030170 pyridoxal phosphate binding IEP HCCA
MF GO:0043167 ion binding IEP HCCA
MF GO:0043169 cation binding IEP HCCA
MF GO:0046872 metal ion binding IEP HCCA
MF GO:0046906 tetrapyrrole binding IEP HCCA
MF GO:0046914 transition metal ion binding IEP HCCA
BP GO:0055114 obsolete oxidation-reduction process IEP HCCA
MF GO:0070279 vitamin B6 binding IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
InterPro domains Description Start Stop
IPR004146 DC1 5 33
No external refs found!