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  5. LOC_Os09g20350.1

LOC_Os09g20350.1 (RAP2.4, LOC_Os09g20350)


Aliases : RAP2.4, LOC_Os09g20350

Description : transcription factor (DREB)


Gene families : OG0000003 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os09g20350.1

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00150p00091360 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.AP2/ERF... 0.03 OrthoFinder output from all 47 species
AT1G28160 No alias Integrase-type DNA-binding superfamily protein 0.03 OrthoFinder output from all 47 species
AT1G68550 No alias Integrase-type DNA-binding superfamily protein 0.04 OrthoFinder output from all 47 species
AT1G71520 No alias Integrase-type DNA-binding superfamily protein 0.03 OrthoFinder output from all 47 species
AT2G40220 ABI4, SAN5,... Integrase-type DNA-binding superfamily protein 0.02 OrthoFinder output from all 47 species
AT4G18450 No alias Integrase-type DNA-binding superfamily protein 0.02 OrthoFinder output from all 47 species
AT4G39780 No alias Integrase-type DNA-binding superfamily protein 0.02 OrthoFinder output from all 47 species
AT5G07310 No alias Integrase-type DNA-binding superfamily protein 0.02 OrthoFinder output from all 47 species
AT5G07580 No alias Integrase-type DNA-binding superfamily protein 0.02 OrthoFinder output from all 47 species
AT5G67190 DEAR2 DREB and EAR motif protein 2 0.02 OrthoFinder output from all 47 species
Adi_g013120 ATERF11, ERF11 subgroup ERF-VIII transcription factor & original... 0.03 OrthoFinder output from all 47 species
Adi_g034904 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g053440 ATERF4, RAP2.5,... subgroup ERF-VIII transcription factor & original... 0.02 OrthoFinder output from all 47 species
Adi_g059856 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g03062 DREB26 subgroup ERF-II transcription factor *(ERF16/17/18) &... 0.02 OrthoFinder output from all 47 species
Aev_g09461 TINY2 subgroup ERF-III transcription factor & original... 0.02 OrthoFinder output from all 47 species
Aev_g42330 DEAR1, CEJ1, ATERF#011 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g16147 ERF7, ATERF7, ATERF-7 subgroup ERF-VIII transcription factor & original... 0.03 OrthoFinder output from all 47 species
Als_g18227 ERF72, EBP, ATEBP, RAP2.3 transcription factor component *(HRE/RAP2.12) of... 0.03 OrthoFinder output from all 47 species
Aob_g04287 RAP2.12 transcription factor component *(HRE/RAP2.12) of... 0.02 OrthoFinder output from all 47 species
Aob_g17354 RAP2.6 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g36093 HRE2 transcription factor component *(HRE/RAP2.12) of... 0.02 OrthoFinder output from all 47 species
Aop_g25492 DEAR1, CEJ1, ATERF#011 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene08042.t1 DREB2A, DREB2,... subgroup ERF-IV/DREB2 transcription factor & original... 0.02 OrthoFinder output from all 47 species
Aspi01Gene15309.t1 ERF72, EBP,... transcription factor component *(HRE/RAP2.12) of... 0.04 OrthoFinder output from all 47 species
Aspi01Gene17041.t1 Aspi01Gene17041 subgroup ERF-III transcription factor & original... 0.02 OrthoFinder output from all 47 species
Aspi01Gene18475.t1 Aspi01Gene18475 subgroup ERF-V transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene24402.t1 DEAR2, Aspi01Gene24402 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene29677.t1 PUCHI, Aspi01Gene29677 subgroup ERF-VIII transcription factor & original... 0.03 OrthoFinder output from all 47 species
Aspi01Gene56620.t1 RAP2.9, DEAR5,... not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene56622.t1 RAP2.9, DEAR5,... not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene69856.t1 Aspi01Gene69856 cutin and suberin biosynthesis transcription factor... 0.02 OrthoFinder output from all 47 species
Aspi01Gene72130.t1 TINY2, Aspi01Gene72130 subgroup ERF-III transcription factor & original... 0.03 OrthoFinder output from all 47 species
Azfi_s2254.g109997 ATERF3, ERF3 subgroup ERF-VIII transcription factor & original... 0.03 OrthoFinder output from all 47 species
Cba_g06839 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g22237 RAP2.4 subgroup ERF-I transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g24352 RAP2.2 transcription factor component *(HRE/RAP2.12) of... 0.02 OrthoFinder output from all 47 species
Cba_g26099 DREB26 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g26267 ATERF-9, ERF9, ATERF9 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g33790 DEAR1, CEJ1, ATERF#011 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g14879 ERF110 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g33212 HRE2 transcription factor component *(HRE/RAP2.12) of... 0.03 OrthoFinder output from all 47 species
Dcu_g42203 No alias subgroup ERF-V transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g45380 ERF-1, ATERF-1 subgroup ERF-IX transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g02774 RAP2.2 transcription factor component *(HRE/RAP2.12) of... 0.02 OrthoFinder output from all 47 species
Dde_g08064 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g17593 CRF3 subgroup ERF-VI transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g08401 No alias subgroup ERF-IV/DREB2 transcription factor & original... 0.04 OrthoFinder output from all 47 species
Ehy_g08445 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g10951 HRE2 transcription factor component *(HRE/RAP2.12) of... 0.02 OrthoFinder output from all 47 species
Ehy_g11677 No alias subgroup ERF-V transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g12089 RAP2.12 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g18185 TINY2 subgroup ERF-III transcription factor & original... 0.03 OrthoFinder output from all 47 species
GSVIVT01006277001 No alias RNA biosynthesis.transcriptional activation.AP2/ERF... 0.03 OrthoFinder output from all 47 species
Gb_17988 RAP2.9, DEAR5 transcription factor (DREB) 0.03 OrthoFinder output from all 47 species
Gb_39497 ERF7, ATERF7, ATERF-7 transcription factor (ERF) 0.02 OrthoFinder output from all 47 species
LOC_Os01g12440.1 TMO3, CRF2,... transcription factor (ERF) 0.04 OrthoFinder output from all 47 species
LOC_Os05g41760.1 ATERF12, ERF12,... transcription factor (ERF) 0.04 OrthoFinder output from all 47 species
LOC_Os06g47590.1 ATERF3, ERF3,... no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
Len_g07511 CRF3 subgroup ERF-VI transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Len_g11014 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Len_g15213 WIN1, SHN1 subgroup ERF-V transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Len_g15998 CRF4 subgroup ERF-VI transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Len_g34955 TINY2 subgroup ERF-III transcription factor & original... 0.02 OrthoFinder output from all 47 species
Lfl_g01837 DREB2A, DREB2 subgroup ERF-IV/DREB2 transcription factor & original... 0.03 OrthoFinder output from all 47 species
MA_113446g0010 ORA47 transcription factor (DREB) 0.02 OrthoFinder output from all 47 species
MA_130669g0010 No alias transcription factor (DREB) 0.03 OrthoFinder output from all 47 species
MA_30120g0010 DRN-LIKE, ESR2,... transcription factor (ERF) 0.02 OrthoFinder output from all 47 species
MA_3405g0010 ERF-1, ATERF-1 transcription factor (ERF) 0.02 OrthoFinder output from all 47 species
MA_84578g0010 HRE1 transcription factor (ERF) 0.02 OrthoFinder output from all 47 species
Msp_g04749 ERF7, ATERF7, ATERF-7 subgroup ERF-VIII transcription factor & original... 0.03 OrthoFinder output from all 47 species
Msp_g04750 ERF7, ATERF7, ATERF-7 subgroup ERF-VIII transcription factor & original... 0.02 OrthoFinder output from all 47 species
Msp_g09157 DREB2A, DREB2 subgroup ERF-IV/DREB2 transcription factor & original... 0.02 OrthoFinder output from all 47 species
Msp_g12537 CRF4 subgroup ERF-VI transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g25476 CRF4 subgroup ERF-VI transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Msp_g30591 TINY2 subgroup ERF-III transcription factor & original... 0.02 OrthoFinder output from all 47 species
Nbi_g01764 ERF7, ATERF7, ATERF-7 subgroup ERF-VIII transcription factor & original... 0.03 OrthoFinder output from all 47 species
Nbi_g04123 TINY2 subgroup ERF-III transcription factor & original... 0.03 OrthoFinder output from all 47 species
Nbi_g14069 tny subgroup ERF-III transcription factor & original... 0.02 OrthoFinder output from all 47 species
Nbi_g26195 RAP2.2 transcription factor component *(HRE/RAP2.12) of... 0.02 OrthoFinder output from all 47 species
Ore_g03908 DREB2A, DREB2 subgroup ERF-IV/DREB2 transcription factor & original... 0.05 OrthoFinder output from all 47 species
Ore_g08975 HRE2 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g10578 ATERF-9, ERF9, ATERF9 subgroup ERF-VIII transcription factor & original... 0.02 OrthoFinder output from all 47 species
Ore_g28637 ATERF-9, ERF9, ATERF9 subgroup ERF-VIII transcription factor & original... 0.03 OrthoFinder output from all 47 species
Ore_g40725 ATERF12, ERF12 subgroup ERF-VIII transcription factor & original... 0.02 OrthoFinder output from all 47 species
Ore_g41367 ERF-1, ATERF-1 subgroup ERF-IX transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g44015 ATERF-9, ERF9, ATERF9 subgroup ERF-VIII transcription factor & original... 0.02 OrthoFinder output from all 47 species
Ore_g44016 ATERF3, ERF3 subgroup ERF-VIII transcription factor & original... 0.02 OrthoFinder output from all 47 species
Pir_g15146 ATERF-9, ERF9, ATERF9 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g18798 TINY2 subgroup ERF-III transcription factor & original... 0.03 OrthoFinder output from all 47 species
Pir_g28144 DDF1 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g35430 ERF1, ATERF1 subgroup ERF-IX transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g35803 TINY2 subgroup ERF-III transcription factor & original... 0.02 OrthoFinder output from all 47 species
Pir_g36910 CBF4, DREB1D subgroup ERF-III transcription factor & original... 0.02 OrthoFinder output from all 47 species
Pir_g37562 HRE1 transcription factor component *(HRE/RAP2.12) of... 0.02 OrthoFinder output from all 47 species
Pir_g48572 No alias subgroup ERF-III transcription factor & original... 0.02 OrthoFinder output from all 47 species
Pir_g51434 CBF4, DREB1D transcription factor *(CBF/DREB1) & original description: none 0.02 OrthoFinder output from all 47 species
Pnu_g09943 ATERF-9, ERF9, ATERF9 subgroup ERF-VIII transcription factor & original... 0.04 OrthoFinder output from all 47 species
Pnu_g12819 ATERF-9, ERF9, ATERF9 subgroup ERF-VIII transcription factor & original... 0.03 OrthoFinder output from all 47 species
Pp3c10_11910V3.1 Pp3c10_11910 Integrase-type DNA-binding superfamily protein 0.01 OrthoFinder output from all 47 species
Pp3c5_11150V3.1 Pp3c5_11150 Integrase-type DNA-binding superfamily protein 0.01 OrthoFinder output from all 47 species
Ppi_g12543 ATERF8, ATERF-8, ERF8 subgroup ERF-VIII transcription factor & original... 0.02 OrthoFinder output from all 47 species
Ppi_g17524 No alias subgroup ERF-I transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g42614 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g55442 HRE2 transcription factor component *(HRE/RAP2.12) of... 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0130.g022062 No alias subgroup ERF-VI transcription factor & original... 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0200.g025602 No alias subgroup ERF-V transcription factor & original... 0.03 OrthoFinder output from all 47 species
Sam_g18921 No alias transcription factor component *(HRE/RAP2.12) of... 0.02 OrthoFinder output from all 47 species
Solyc02g077360.1.1 Solyc02g077360 transcription factor (ERF) 0.03 OrthoFinder output from all 47 species
Solyc02g077840.2.1 ATERF12, ERF12,... transcription factor (ERF) 0.03 OrthoFinder output from all 47 species
Solyc03g093540.1.1 Solyc03g093540 transcription factor (ERF) 0.04 OrthoFinder output from all 47 species
Solyc03g120840.3.1 TINY2, Solyc03g120840 transcription factor (DREB) 0.02 OrthoFinder output from all 47 species
Spa_g24935 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g00486 ERF7, ATERF7, ATERF-7 subgroup ERF-VIII transcription factor & original... 0.03 OrthoFinder output from all 47 species
Zm00001e007332_P001 Zm00001e007332 transcription factor (DREB) 0.03 OrthoFinder output from all 47 species
Zm00001e013096_P001 ATERF3, ERF3,... no hits & (original description: none) 0.06 OrthoFinder output from all 47 species
Zm00001e013927_P001 ATERF3, ERF3,... transcription factor (ERF) 0.03 OrthoFinder output from all 47 species
Zm00001e016421_P001 CRF4, Zm00001e016421 transcription factor (ERF) 0.04 OrthoFinder output from all 47 species
Zm00001e019026_P001 CRF3, Zm00001e019026 transcription factor (ERF) 0.04 OrthoFinder output from all 47 species
Zm00001e019567_P001 ATERF4, RAP2.5,... transcription factor (ERF) 0.03 OrthoFinder output from all 47 species
Zm00001e023686_P001 Zm00001e023686 transcription factor (ERF) 0.02 OrthoFinder output from all 47 species
Zm00001e025064_P001 ATERF3, ERF3,... transcription factor (ERF) 0.03 OrthoFinder output from all 47 species
Zm00001e027351_P001 ATERF4, RAP2.5,... transcription factor (ERF) 0.03 OrthoFinder output from all 47 species
Zm00001e028920_P001 ATERF4, RAP2.5,... transcription factor (ERF) 0.04 OrthoFinder output from all 47 species
Zm00001e032033_P001 ATERF-9, ERF9,... transcription factor (ERF) 0.03 OrthoFinder output from all 47 species
Zm00001e033965_P001 RAP2.4, Zm00001e033965 transcription factor (DREB) 0.09 OrthoFinder output from all 47 species
Zm00001e035837_P001 ERF72, EBP,... transcription factor (ERF) 0.02 OrthoFinder output from all 47 species
Zm00001e038525_P001 DREB26, Zm00001e038525 Ethylene-responsive transcription factor ERF013... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEA Interproscan
BP GO:0006355 regulation of DNA-templated transcription IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
BP GO:0031503 protein-containing complex localization IEP HCCA
BP GO:0033566 gamma-tubulin complex localization IEP HCCA
InterPro domains Description Start Stop
IPR001471 AP2/ERF_dom 111 159
No external refs found!