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  5. LOC_Os09g27730.1

LOC_Os09g27730.1 (LOC_Os09g27730)


Aliases : LOC_Os09g27730

Description : Protein HVA22 OS=Hordeum vulgare (sp|q07764|hva22_horvu : 114.0)


Gene families : OG0000842 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000842_tree

Sequence : coding (download), protein (download)


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Type Description Actions
Neighborhood HRR: LOC_Os09g27730.1

Target Alias Description ECC score Gene Family Method Actions
AT2G42820 HVA22F HVA22-like protein F 0.03 OrthoFinder output from all 47 species
Ceric.08G053300.1 HVA22F, Ceric.08G053300 not classified & original description: pacid=50637741... 0.03 OrthoFinder output from all 47 species
GSVIVT01000808001 HVA22F HVA22-like protein f OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
Gb_24347 HVA22F HVA22-like protein f OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Msp_g09973 HVA22F not classified & original description: none 0.03 OrthoFinder output from all 47 species
Smo417586 No alias No description available 0.04 OrthoFinder output from all 47 species
Zm00001e009930_P001 HVA22D,... Protein HVA22 OS=Hordeum vulgare (sp|q07764|hva22_horvu : 161.0) 0.05 OrthoFinder output from all 47 species
Zm00001e028216_P002 HVA22F, Zm00001e028216 HVA22-like protein f OS=Arabidopsis thaliana... 0.06 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEP HCCA
MF GO:0004650 polygalacturonase activity IEP HCCA
BP GO:0005975 carbohydrate metabolic process IEP HCCA
MF GO:0016798 hydrolase activity, acting on glycosyl bonds IEP HCCA
InterPro domains Description Start Stop
IPR004345 TB2_DP1_HVA22 2 68
No external refs found!