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  5. LOC_Os09g29670.1

LOC_Os09g29670.1 (ATWBC11, ABCG11, DSO,...)


Aliases : ATWBC11, ABCG11, DSO, COF1, WBC11, LOC_Os09g29670

Description : subfamily ABCG transporter


Gene families : OG0000139 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000139_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os09g29670.1

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00171p00031180 ATWBC11, ABCG11,... Solute transport.primary active transport.ABC... 0.03 OrthoFinder output from all 47 species
Als_g07441 ATWBC11, ABCG11,... subfamily ABCG transporter & original description: none 0.02 OrthoFinder output from all 47 species
Azfi_s0027.g023711 ATWBC11, ABCG11,... subfamily ABCG transporter & original description: CDS=225-2489 0.02 OrthoFinder output from all 47 species
Cba_g19302 ATWBC11, ABCG11,... subfamily ABCG transporter & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g23849 ATWBC11, ABCG11,... subfamily ABCG transporter & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g34439 ATWBC11, ABCG11,... not classified & original description: none 0.02 OrthoFinder output from all 47 species
MA_10436774g0010 ATWBC11, ABCG11,... subfamily ABCG transporter 0.03 OrthoFinder output from all 47 species
Mp8g12130.1 ATWBC11, ABCG11,... subfamily ABCG transporter 0.05 OrthoFinder output from all 47 species
Ppi_g03882 ATWBC11, ABCG11,... subfamily ABCG transporter & original description: none 0.01 OrthoFinder output from all 47 species
Ppi_g06440 ATWBC11, ABCG11,... subfamily ABCG transporter & original description: none 0.03 OrthoFinder output from all 47 species
Solyc06g072090.3.1 ATWBC11, ABCG11,... suberin/cutin lipid exporter (DSO). subfamily ABCG transporter 0.05 OrthoFinder output from all 47 species
Zm00001e004489_P001 ATWBC11, ABCG11,... suberin/cutin lipid exporter (DSO). subfamily ABCG transporter 0.05 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEA Interproscan
CC GO:0016020 membrane IEA Interproscan
MF GO:0016887 ATP hydrolysis activity IEA Interproscan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR003439 ABC_transporter-like_ATP-bd 129 276
IPR013525 ABC_2_trans 426 638
No external refs found!