Aliases : LOC_Os09g35960
Description : RAB-GTPase-activating protein (RAB-GAP)
Gene families : OG0001800 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001800_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: LOC_Os09g35960.1 | |
| Cluster | HCCA: Cluster_106 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AMTR_s00027p00080950 | evm_27.TU.AmTr_v1... | Vesicle trafficking.regulation of membrane tethering and... | 0.03 | OrthoFinder output from all 47 species | |
| AT3G49350 | No alias | Ypt/Rab-GAP domain of gyp1p superfamily protein | 0.02 | OrthoFinder output from all 47 species | |
| AT5G53570 | No alias | Ypt/Rab-GAP domain of gyp1p superfamily protein | 0.05 | OrthoFinder output from all 47 species | |
| Adi_g113835 | No alias | Rab GTPase-activating protein & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ala_g12211 | No alias | Rab GTPase-activating protein & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Als_g05554 | No alias | Rab GTPase-activating protein & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Aob_g02030 | No alias | Rab GTPase-activating protein & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aob_g16154 | No alias | Rab GTPase-activating protein & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Cba_g01958 | No alias | Rab GTPase-activating protein & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Dcu_g14559 | No alias | Rab GTPase-activating protein & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Dde_g26193 | No alias | Rab GTPase-activating protein & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ehy_g03861 | No alias | Rab GTPase-activating protein & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ehy_g06939 | No alias | Rab GTPase-activating protein & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ehy_g24582 | No alias | Rab GTPase-activating protein & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ehy_g25427 | No alias | Rab GTPase-activating protein & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| GSVIVT01038614001 | No alias | Vesicle trafficking.regulation of membrane tethering and... | 0.04 | OrthoFinder output from all 47 species | |
| Gb_39393 | No alias | RAB-GTPase-activating protein (RAB-GAP) | 0.02 | OrthoFinder output from all 47 species | |
| LOC_Os08g43380.1 | LOC_Os08g43380 | RAB-GTPase-activating protein (RAB-GAP) | 0.01 | OrthoFinder output from all 47 species | |
| Len_g36667 | No alias | Rab GTPase-activating protein & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Nbi_g03078 | No alias | Rab GTPase-activating protein & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Pir_g16469 | No alias | Rab GTPase-activating protein & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ppi_g11911 | No alias | Rab GTPase-activating protein & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Ppi_g62474 | No alias | Rab GTPase-activating protein & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0002.g000976 | No alias | Rab GTPase-activating protein & original description:... | 0.05 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0055.g014380 | No alias | Rab GTPase-activating protein & original description:... | 0.03 | OrthoFinder output from all 47 species | |
| Smo92613 | No alias | Vesicle trafficking.regulation of membrane tethering and... | 0.03 | OrthoFinder output from all 47 species | |
| Spa_g09071 | No alias | Rab GTPase-activating protein & original description: none | 0.02 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| CC | GO:0000139 | Golgi membrane | IEP | HCCA |
| MF | GO:0000166 | nucleotide binding | IEP | HCCA |
| MF | GO:0003674 | molecular_function | IEP | HCCA |
| MF | GO:0003824 | catalytic activity | IEP | HCCA |
| MF | GO:0004672 | protein kinase activity | IEP | HCCA |
| MF | GO:0004674 | protein serine/threonine kinase activity | IEP | HCCA |
| MF | GO:0005338 | nucleotide-sugar transmembrane transporter activity | IEP | HCCA |
| MF | GO:0005524 | ATP binding | IEP | HCCA |
| BP | GO:0006468 | protein phosphorylation | IEP | HCCA |
| BP | GO:0006486 | protein glycosylation | IEP | HCCA |
| BP | GO:0006793 | phosphorus metabolic process | IEP | HCCA |
| BP | GO:0006796 | phosphate-containing compound metabolic process | IEP | HCCA |
| BP | GO:0006807 | nitrogen compound metabolic process | IEP | HCCA |
| BP | GO:0006886 | intracellular protein transport | IEP | HCCA |
| BP | GO:0008150 | biological_process | IEP | HCCA |
| BP | GO:0008152 | metabolic process | IEP | HCCA |
| BP | GO:0009987 | cellular process | IEP | HCCA |
| MF | GO:0015165 | pyrimidine nucleotide-sugar transmembrane transporter activity | IEP | HCCA |
| BP | GO:0015780 | nucleotide-sugar transmembrane transport | IEP | HCCA |
| BP | GO:0015931 | nucleobase-containing compound transport | IEP | HCCA |
| MF | GO:0015932 | nucleobase-containing compound transmembrane transporter activity | IEP | HCCA |
| CC | GO:0016020 | membrane | IEP | HCCA |
| MF | GO:0016301 | kinase activity | IEP | HCCA |
| BP | GO:0016310 | phosphorylation | IEP | HCCA |
| BP | GO:0016567 | protein ubiquitination | IEP | HCCA |
| MF | GO:0016740 | transferase activity | IEP | HCCA |
| MF | GO:0016772 | transferase activity, transferring phosphorus-containing groups | IEP | HCCA |
| MF | GO:0016773 | phosphotransferase activity, alcohol group as acceptor | IEP | HCCA |
| MF | GO:0017076 | purine nucleotide binding | IEP | HCCA |
| BP | GO:0019538 | protein metabolic process | IEP | HCCA |
| MF | GO:0030554 | adenyl nucleotide binding | IEP | HCCA |
| CC | GO:0031090 | organelle membrane | IEP | HCCA |
| BP | GO:0032446 | protein modification by small protein conjugation | IEP | HCCA |
| MF | GO:0032553 | ribonucleotide binding | IEP | HCCA |
| MF | GO:0032555 | purine ribonucleotide binding | IEP | HCCA |
| MF | GO:0032559 | adenyl ribonucleotide binding | IEP | HCCA |
| MF | GO:0035639 | purine ribonucleoside triphosphate binding | IEP | HCCA |
| MF | GO:0036094 | small molecule binding | IEP | HCCA |
| BP | GO:0036211 | protein modification process | IEP | HCCA |
| MF | GO:0043168 | anion binding | IEP | HCCA |
| BP | GO:0043170 | macromolecule metabolic process | IEP | HCCA |
| BP | GO:0043412 | macromolecule modification | IEP | HCCA |
| BP | GO:0043413 | macromolecule glycosylation | IEP | HCCA |
| BP | GO:0044237 | cellular metabolic process | IEP | HCCA |
| BP | GO:0044238 | primary metabolic process | IEP | HCCA |
| BP | GO:0070085 | glycosylation | IEP | HCCA |
| BP | GO:0071702 | organic substance transport | IEP | HCCA |
| BP | GO:0071704 | organic substance metabolic process | IEP | HCCA |
| BP | GO:0071705 | nitrogen compound transport | IEP | HCCA |
| BP | GO:0090481 | pyrimidine nucleotide-sugar transmembrane transport | IEP | HCCA |
| MF | GO:0097367 | carbohydrate derivative binding | IEP | HCCA |
| CC | GO:0098588 | bounding membrane of organelle | IEP | HCCA |
| MF | GO:0140096 | catalytic activity, acting on a protein | IEP | HCCA |
| BP | GO:1901264 | carbohydrate derivative transport | IEP | HCCA |
| MF | GO:1901265 | nucleoside phosphate binding | IEP | HCCA |
| MF | GO:1901505 | carbohydrate derivative transmembrane transporter activity | IEP | HCCA |
| BP | GO:1901564 | organonitrogen compound metabolic process | IEP | HCCA |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR000195 | Rab-GTPase-TBC_dom | 377 | 497 |
| No external refs found! |
