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  5. LOC_Os09g37880.1

LOC_Os09g37880.1 (RK3, ARK3, LOC_Os09g37880)


Aliases : RK3, ARK3, LOC_Os09g37880

Description : protein kinase (SD-1)


Gene families : OG0016404 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0016404_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os09g37880.1

Target Alias Description ECC score Gene Family Method Actions
LOC_Os09g37800.1 B120, LOC_Os09g37800 protein kinase (SD-1) 0.04 OrthoFinder output from all 47 species
LOC_Os09g37834.1 B120, LOC_Os09g37834 protein kinase (SD-1) 0.05 OrthoFinder output from all 47 species
LOC_Os09g37840.1 RK3, ARK3, LOC_Os09g37840 protein kinase (SD-1) 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0004672 protein kinase activity IEA Interproscan
MF GO:0005524 ATP binding IEA Interproscan
BP GO:0006468 protein phosphorylation IEA Interproscan
BP GO:0048544 recognition of pollen IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004175 endopeptidase activity IEP HCCA
MF GO:0004252 serine-type endopeptidase activity IEP HCCA
MF GO:0005515 protein binding IEP HCCA
MF GO:0008236 serine-type peptidase activity IEP HCCA
MF GO:0017171 serine hydrolase activity IEP HCCA
BP GO:0055114 obsolete oxidation-reduction process IEP HCCA
InterPro domains Description Start Stop
IPR000719 Prot_kinase_dom 522 719
IPR003609 Pan_app 346 412
IPR001480 Bulb-type_lectin_dom 77 180
IPR000858 S_locus_glycoprot_dom 213 323
No external refs found!