LOC_Os09g38170.1 (LOC_Os09g38170)

Aliases : LOC_Os09g38170

Description : no hits & (original description: none)

Gene families : OG0007021 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0007021_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: LOC_Os09g38170.1
Cluster	HCCA: Cluster_31

Target	Alias	Description	ECC score	Gene Family Method
ChrUn.fgenesh.mRNA.78	No alias	no hits & (original description: none)	0.05	OrthoFinder output from all 47 species
LOC_Os01g09330.1	LOC_Os01g09330	no hits & (original description: none)	0.05	OrthoFinder output from all 47 species
LOC_Os01g26960.1	LOC_Os01g26960	no hits & (original description: none)	0.02	OrthoFinder output from all 47 species
LOC_Os02g18530.1	ORF154, LOC_Os02g18530	no hits & (original description: none)	0.04	OrthoFinder output from all 47 species
LOC_Os02g26760.1	LOC_Os02g26760	no hits & (original description: none)	0.02	OrthoFinder output from all 47 species
LOC_Os02g32050.1	LOC_Os02g32050	no hits & (original description: none)	0.04	OrthoFinder output from all 47 species
LOC_Os03g25560.1	LOC_Os03g25560	no hits & (original description: none)	0.04	OrthoFinder output from all 47 species
LOC_Os03g29330.1	LOC_Os03g29330	no hits & (original description: none)	0.06	OrthoFinder output from all 47 species
LOC_Os03g56170.1	LOC_Os03g56170	no hits & (original description: none)	0.05	OrthoFinder output from all 47 species
LOC_Os04g13430.1	LOC_Os04g13430	no hits & (original description: none)	0.02	OrthoFinder output from all 47 species
LOC_Os06g21680.1	LOC_Os06g21680	no hits & (original description: none)	0.06	OrthoFinder output from all 47 species
LOC_Os08g09440.1	LOC_Os08g09440	Putative ribonuclease H protein At1g65750 OS=Arabidopsis...	0.03	OrthoFinder output from all 47 species
LOC_Os09g02040.1	ORF154, LOC_Os09g02040	no hits & (original description: none)	0.04	OrthoFinder output from all 47 species
LOC_Os10g29450.1	LOC_Os10g29450	no hits & (original description: none)	0.03	OrthoFinder output from all 47 species
LOC_Os11g03360.1	LOC_Os11g03360	no hits & (original description: none)	0.05	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	IEA	Interproscan
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0004518	nuclease activity	None	Extended
MF	GO:0004519	endonuclease activity	None	Extended
MF	GO:0004521	endoribonuclease activity	None	Extended
MF	GO:0004523	RNA-DNA hybrid ribonuclease activity	IEA	Interproscan
MF	GO:0004540	ribonuclease activity	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0016787	hydrolase activity	None	Extended
MF	GO:0016788	hydrolase activity, acting on ester bonds	None	Extended
MF	GO:0016891	endoribonuclease activity, producing 5'-phosphomonoesters	None	Extended
MF	GO:0016893	endonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 5'-phosphomonoesters	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0140098	catalytic activity, acting on RNA	None	Extended
MF	GO:0140640	catalytic activity, acting on a nucleic acid	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

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Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Start	Stop
IPR026960	RVT-Znf	55	150
IPR002156	RNaseH_domain	275	397

External Links

No external refs found!

LOC_Os09g38170.1 (LOC_Os09g38170)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation